myRT

myRT report for GCA_001022495.2_ASM102249v2

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Seq: LEDV02000007.1 Enterobacter kobei strain GN02457 contig104, whole genome shotgun sequence (459468 bp)
Overview 1 RT 1: 212174-218384 bp 2 RT 2: 338100-343933 bp Neighborhood of RT #1 [212174, 218386] L-Ala-D-Glu_peptidase_like RVT-UG11 PRK10201 PRK05658 Neighborhood of RT #2 [338100, 343935] scrB_fam fruct_sucro_rep RVT-GII GIIM PHA02517 HTH_38 HTH_38 Feature: gene Location: 212174-212479 bp Ori: KYO15920.1 Feature: domain Description: L-Ala-D-Glu_peptidase_like Location: 212189-212459 bp Feature: domain Description: L-Ala-D-Glu_peptidase_like Location: 21 21 89-21 2459 bp Feature: gene Location: 212855-213354 bp Feature: gene Location: 214819-215115 bp Ori: KYO16144.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 214822-214933 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 21 4822-21 4933 bp Feature: gene Location: 215509-216015 bp Ori: KYO15921.1 Feature: domain Description: PRK10201 Location: 215512-216010 bp Feature: domain Description: PRK1 0201 Location: 21 551 2-21 601 0 bp Feature: gene Location: 216542-218386 bp Ori: KYO15922.1 Feature: domain Description: PRK05658 Location: 216548-218384 bp Feature: domain Description: PRK05658 Location: 21 6548-21 8384 bp Feature: gene Location: 338100-339500 bp Ori: KYO16034.1 Feature: domain Description: scrB_fam Location: 338145-339417 bp Feature: domain Description: scrB_fam Location: 3381 45-33941 7 bp Feature: gene Location: 339530-340534 bp Ori: KYO16035.1 Feature: domain Description: fruct_sucro_rep Location: 339551-340529 bp Feature: domain Description: fruct_sucro_rep Location: 339551 -340529 bp Feature: gene Location: 340968-342476 bp Ori: KYO16036.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341226-341958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 341 226-341 958 bp Feature: domain Description: GIIM Note: maturase Location: 342033-342231 bp Feature: domain Description: GIIM Note: maturase Location: 342033-342231 bp Feature: gene Location: 343083-343508 bp Ori: KYO16037.1 Feature: domain Description: PHA02517 Location: 343107-343443 bp Feature: domain Description: PHA0251 7 Location: 3431 07-343443 bp Feature: gene Location: 343639-343935 bp Ori: KYO16038.1 Feature: domain Description: HTH_38 Location: 343651-343762 bp Feature: domain Description: HTH_38 Location: 343651 -343762 bp Feature: domain Description: HTH_38 Location: 343813-343933 bp Feature: domain Description: HTH_38 Location: 34381 3-343933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT L-Ala-D-Glu_peptidase_like (cd14845), RVT-UG11, PRK10201 (G/U mismatch-specific DNA glycosylase), PRK05658 (RNA polymerase sigma factor RpoD; Validated), scrB_fam (TIGR01322), fruct_sucro_rep (TIGR02417), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), HTH_38 (pfam13936)