myRT

myRT report for GCA_001022805.1_ASM102280v1

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Seq: LEER01000009.1 Enterobacter ludwigii strain GN02730 contig9, whole genome shotgun sequence (172053 bp)
Overview 1 RT 1: 141386-145499 bp 2 RT 2: 166967-171926 bp Neighborhood of RT #1 [141386, 145499] CbeA_antitoxin DUF987 RVT_N RVT-GII GIIM Antirestrict Neighborhood of RT #2 [166967, 172053] FimC FimD RVT-UG4 Feature: gene Location: 141386-141745 bp Ori: KLP44157.1 Feature: domain Description: CbeA_antitoxin Location: 141431-141728 bp Feature: domain Description: CbeA_antitoxin Location: 1 41 431 -1 41 728 bp Feature: gene Location: 141769-141990 bp Ori: KLP44158.1 Feature: domain Description: DUF987 Location: 141772-141964 bp Feature: domain Description: DUF987 Location: 1 41 772-1 41 964 bp Feature: gene Location: 142798-144276 bp Ori: KLP44159.1 Feature: domain Description: RVT_N Location: 142849-143092 bp Feature: domain Description: RVT_N Location: 1 42849-1 43092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143137-143782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 431 37-1 43782 bp Feature: domain Description: GIIM Note: maturase Location: 143836-144070 bp Feature: domain Description: GIIM Note: maturase Location: 1 43836-1 44070 bp Feature: gene Location: 144749-145228 bp Ori: KLP44160.1 Feature: domain Description: Antirestrict Location: 144944-145226 bp Feature: domain Description: Antirestrict Location: 1 44944-1 45226 bp Feature: gene Location: 145245-145499 bp Feature: gene Location: 166967-167689 bp Ori: KLP44179.1 Feature: domain Description: FimC Location: 167000-167678 bp Feature: domain Description: FimC Location: 1 67000-1 67678 bp Feature: gene Location: 167717-170332 bp Ori: KLP44180.1 Feature: domain Description: FimD Location: 167777-170330 bp Feature: domain Description: FimD Location: 1 67777-1 70330 bp Feature: gene Location: 171122-172053 bp Ori: KLP44181.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 171479-171926 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 71 479-1 71 926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CbeA_antitoxin (pfam06154), DUF987 (pfam06174), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Antirestrict (pfam03230), FimC (COG3121), FimD (COG3188), RVT-UG4