myRT

myRT report for GCA_001023345.1_ASM102334v1

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Seq: LEEH01000028.1 Enterobacter hormaechei subsp. steigerwaltii strain GN02320 contig28, whole genome shotgun sequence (26152 bp)
Overview 1 RT 1: 6503-11601 bp Neighborhood of RT #1 [6503, 11603] VOC_like fghA_ester_D RVT-GII GIIM PHA02517 PRK11352 Feature: gene Location: 6503-6901 bp Feature: domain Description: VOC_like Location: 6539-6890 bp Feature: domain Description: VOC_like Location: 6539-6890 bp Feature: gene Location: 6966-7802 bp Feature: domain Description: fghA_ester_D Location: 6972-7788 bp Feature: domain Description: fghA_ester_D Location: 6972-7788 bp Feature: gene Location: 8539-10047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8797-9529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8797-9529 bp Feature: domain Description: GIIM Note: maturase Location: 9604-9802 bp Feature: domain Description: GIIM Note: maturase Location: 9604-9802 bp Feature: gene Location: 10654-11079 bp Feature: domain Description: PHA02517 Location: 10675-11014 bp Feature: domain Description: PHA0251 7 Location: 1 0675-1 1 01 4 bp Feature: gene Location: 11295-11603 bp Feature: domain Description: PRK11352 Location: 11460-11601 bp Feature: domain Description: PRK1 1 352 Location: 1 1 460-1 1 601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), PRK11352 (formaldehyde-responsive transcriptional repressor FrmR), VOC_like (cd16355), fghA_ester_D (TIGR02821), RVT-GII, GIIM (pfam08388)

Seq: LEEH01000001.1 Enterobacter hormaechei subsp. steigerwaltii strain GN02320 contig1, whole genome shotgun sequence (129352 bp)
Overview 1 RT 1: 92779-100561 bp Neighborhood of RT #1 [92779, 100782] FI AAA_15 RVT-Retrons Caudo_TAP COG5301 COG5301 Feature: gene Location: 92779-93969 bp Feature: domain Description: FI Location: 92782-93958 bp Feature: domain Description: FI Location: 92 782 -93958 bp Feature: gene Location: 94469-96733 bp Feature: domain Description: AAA_15 Location: 94472-95495 bp Feature: domain Description: AAA_15 Location: 94472 -95495 bp Feature: gene Location: 96854-97951 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 97022-97568 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 9702 2 -97568 bp Feature: gene Location: 98374-98901 bp Feature: domain Description: Caudo_TAP Location: 98494-98899 bp Feature: domain Description: Caudo_TAP Location: 98494-98899 bp Feature: gene Location: 98905-100782 bp Feature: domain Description: COG5301 Location: 98908-99826 bp Feature: domain Description: COG5301 Location: 98908-9982 6 bp Feature: domain Description: COG5301 Location: 100138-100561 bp Feature: domain Description: COG5301 Location: 100138-100561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FI (PHA02560), AAA_15 (pfam13175), RVT-Retrons, Caudo_TAP (pfam02413), COG5301 (Phage-related tail fibre protein )

Seq: LEEH01000009.1 Enterobacter hormaechei subsp. steigerwaltii strain GN02320 contig9, whole genome shotgun sequence (272708 bp)
Overview 1 RT 1: 208118-215458 bp Neighborhood of RT #1 [208118, 215472] PRK09692 RVT-Retrons Ogr_Delta COG4643 COG5519 Feature: gene Location: 208118-209284 bp Feature: domain Description: PRK09692 Location: 208127-209276 bp Feature: domain Description: PRK09692 Location: 208127-209276 bp Feature: gene Location: 209287-209955 bp Feature: gene Location: 210327-211511 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 210477-211056 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 210477-211056 bp Feature: gene Location: 212235-212507 bp Feature: domain Description: Ogr_Delta Location: 212259-212394 bp Feature: domain Description: Ogr_Delta Location: 212259-2123 94 bp Feature: gene Location: 212785-215472 bp Feature: domain Description: COG4643 Location: 212797-213733 bp Feature: domain Description: COG4643 Location: 212797-213 73 3 bp Feature: domain Description: COG5519 Location: 213790-215458 bp Feature: domain Description: COG5519 Location: 213 790-215458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-Retrons, Ogr_Delta (pfam04606), COG4643 (Uncharacterized domain associated with phage/plasmid primase ), COG5519 (Uncharcterized protein, DUF927 family )