myRT

myRT report for GCA_001028885.1_ASM102888v1

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Seq: LDJV01000032.1 Klebsiella michiganensis strain PHS-890 NODE_60, whole genome shotgun sequence (1916 bp)
Overview 1 RT 1: 61-1153 bp Neighborhood of RT #1 [61, 1545] RVT-GII Feature: gene Location: 61-1545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1 1 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LDJV01000074.1 Klebsiella michiganensis strain PHS-890 NODE_9, whole genome shotgun sequence (233316 bp)
Overview 1 RT 1: 230046-232865 bp Neighborhood of RT #1 [230046, 233110] PRK11352 PHA02517 RVT-GII GIIM Feature: gene Location: 230046-230354 bp Feature: domain Description: PRK11352 Location: 230211-230352 bp Feature: domain Description: PRK11352 Location: 2 302 11-2 30352 bp Feature: gene Location: 230570-230995 bp Feature: domain Description: PHA02517 Location: 230591-230930 bp Feature: domain Description: PHA02 517 Location: 2 30591-2 30930 bp Feature: gene Location: 231602-233110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231860-232592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 31860-2 32 592 bp Feature: domain Description: GIIM Note: maturase Location: 232667-232865 bp Feature: domain Description: GIIM Note: maturase Location: 2 32 667-2 32 865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11352 (formaldehyde-responsive transcriptional repressor FrmR), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: LDJV01000010.1 Klebsiella michiganensis strain PHS-890 NODE_2, whole genome shotgun sequence (429546 bp)
Overview 1 RT 1: 38458-45334 bp Neighborhood of RT #1 [38458, 45360] Psu RVT-Retrons PRK09692 PRK11462 Feature: gene Location: 38458-39024 bp Feature: domain Description: Psu Location: 38476-39016 bp Feature: domain Description: Psu Location: 3 8476-3 9016 bp Feature: gene Location: 39846-40826 bp Feature: gene Location: 40813-41739 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40918-41503 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40918-41503 bp Feature: gene Location: 42252-43418 bp Feature: domain Description: PRK09692 Location: 42261-43404 bp Feature: domain Description: PRK09692 Location: 42261-43 404 bp Feature: gene Location: 43966-45360 bp Feature: domain Description: PRK11462 Location: 43969-45334 bp Feature: domain Description: PRK11462 Location: 43 969-453 3 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), RVT-Retrons, PRK09692 (Integrase; provisional), PRK11462 (putative transporter; Provisional)