myRT

myRT report for GCA_001029435.1_ASM102943v1

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Seq: LDOV01000030.1 Photobacterium aphoticum strain DSM 25995 contig0030, whole genome shotgun sequence (144155 bp)
Overview 1 RT 1: 38086-46610 bp Neighborhood of RT #1 [38086, 46780] DUF5051 Cas2_I_II_III RVT-CRISPR Cas_Cas1 TIGR03986 cas_cyan_RAMP cas_cyan_RAMP cas_cyan_RAMP Feature: gene Location: 38086-38682 bp Ori: KLU99505.1 Feature: domain Description: DUF5051 Location: 38089-38626 bp Feature: domain Description: DUF5051 Location: 38089-38626 bp Feature: gene Location: 39661-39939 bp Ori: KLU99506.1 Feature: domain Description: Cas2_I_II_III Location: 39673-39880 bp Feature: domain Description: Cas2_I_II_III Location: 39673-39880 bp Feature: gene Location: 39975-42836 bp Ori: KLU99507.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 41103-41712 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 41 1 03-41 71 2 bp Feature: domain Description: Cas_Cas1 Location: 41889-42708 bp Feature: domain Description: Cas_Cas1 Location: 41 889-42708 bp Feature: gene Location: 42885-45263 bp Ori: KLU99508.1 Feature: domain Description: TIGR03986 Location: 42909-44871 bp Feature: domain Description: TIGR03986 Location: 42909-44871 bp Feature: gene Location: 45260-46780 bp Ori: KLU99509.1 Feature: domain Description: cas_cyan_RAMP Location: 45395-45881 bp Feature: domain Description: cas_cyan_RAMP Location: 45395-45881 bp Feature: domain Description: cas_cyan_RAMP Location: 46046-46265 bp Feature: domain Description: cas_cyan_RAMP Location: 46046-46265 bp Feature: domain Description: cas_cyan_RAMP Location: 46286-46610 bp Feature: domain Description: cas_cyan_RAMP Location: 46286-4661 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF5051 (pfam16473), Cas2_I_II_III (cl11442), RVT-CRISPR, Cas_Cas1 (pfam01867), TIGR03986 (CRISPR-associated protein), cas_cyan_RAMP (TIGR02581)