myRT

myRT report for GCA_001030225.1_Ente_spec_BIDMC92_V1

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Seq: KQ087599.1 Enterobacter sp. BIDMC92 genomic scaffold aetyS-supercont1.2, whole genome shotgun sequence (100694 bp)
Overview 1 RT 1: 71511-75613 bp 2 RT 2: 85367-87775 bp Neighborhood of RT #1 [71511, 75613] PHA02517 RVT-GII GIIM Neighborhood of RT #2 [85367, 87777] umuC PRK10276 RVT_N RVT-GII PRK10276 YdeI Feature: gene Location: 71511-71648 bp Feature: gene Location: 72295-72501 bp Ori: KLW85425.1 Feature: domain Description: PHA02517 Location: 72298-72490 bp Feature: domain Description: PHA0251 7 Location: 72298-72490 bp Feature: gene Location: 72863-74386 bp Ori: KLW85426.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73136-73868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 36-73868 bp Feature: domain Description: GIIM Note: maturase Location: 73943-74141 bp Feature: domain Description: GIIM Note: maturase Location: 73943-741 41 bp Feature: gene Location: 75017-75124 bp Feature: gene Location: 75347-75613 bp Feature: gene Location: 85367-85534 bp Ori: KLW85437.1 Feature: domain Description: umuC Location: 85370-85532 bp Feature: domain Description: umuC Location: 85370-85532 bp Feature: gene Location: 85534-85662 bp Ori: KLW85438.1 Feature: domain Description: PRK10276 Location: 85555-85642 bp Feature: domain Description: PRK1 0276 Location: 85555-85642 bp Feature: gene Location: 86080-86559 bp Ori: KLW85439.1 Feature: domain Description: RVT_N Location: 86134-86377 bp Feature: domain Description: RVT_N Location: 861 34-86377 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86422-86506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86422-86506 bp Feature: gene Location: 87123-87257 bp Ori: KLW85440.1 Feature: domain Description: PRK10276 Location: 87174-87237 bp Feature: domain Description: PRK1 0276 Location: 871 74-87237 bp Feature: gene Location: 87394-87777 bp Ori: KLW85441.1 Feature: domain Description: YdeI Location: 87397-87775 bp Feature: domain Description: YdeI Location: 87397-87775 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT_N (pfam13655), YdeI (COG4430)

Seq: KQ087598.1 Enterobacter sp. BIDMC92 genomic scaffold aetyS-supercont1.1, whole genome shotgun sequence (4785920 bp)
Overview 1 RT 1: 3665868-3671154 bp 2 RT 2: 3786179-3791717 bp Neighborhood of RT #1 [3665868, 3671154] HNH_2 Tra5 RVT-GII GIIM InsE Neighborhood of RT #2 [3786179, 3791815] InsE RVT-GII GIIM PHA02517 UvrD UvrD Feature: gene Location: 3665868-3667115 bp Ori: KLW88095.1 Feature: domain Description: HNH_2 Location: 3666801-3666957 bp Feature: domain Description: HNH_2 Location: 3666801-3666957 bp Feature: gene Location: 3667535-3667867 bp Ori: KLW88096.1 Feature: domain Description: Tra5 Location: 3667541-3667859 bp Feature: domain Description: Tra5 Location: 3667541-3667859 bp Feature: gene Location: 3668073-3669596 bp Ori: KLW88097.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3668346-3669078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3668346-3669078 bp Feature: domain Description: GIIM Note: maturase Location: 3669153-3669351 bp Feature: domain Description: GIIM Note: maturase Location: 3669153-3669351 bp Feature: gene Location: 3670361-3670645 bp Ori: KLW88098.1 Feature: domain Description: InsE Location: 3670373-3670634 bp Feature: domain Description: InsE Location: 3670373-3670634 bp Feature: gene Location: 3670831-3671154 bp Feature: gene Location: 3786179-3786463 bp Ori: KLW88207.1 Feature: domain Description: InsE Location: 3786191-3786452 bp Feature: domain Description: InsE Location: 3786191-3786452 bp Feature: gene Location: 3786784-3786891 bp Feature: gene Location: 3787522-3789045 bp Ori: KLW88209.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3787795-3788527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3787795-378852 7 bp Feature: domain Description: GIIM Note: maturase Location: 3788602-3788800 bp Feature: domain Description: GIIM Note: maturase Location: 3788602 -3788800 bp Feature: gene Location: 3789210-3789644 bp Ori: KLW88210.1 Feature: domain Description: PHA02517 Location: 3789231-3789579 bp Feature: domain Description: PHA02 517 Location: 37892 31-3789579 bp Feature: gene Location: 3789968-3791815 bp Ori: KLW88211.1 Feature: domain Description: UvrD Location: 3790055-3791321 bp Feature: domain Description: UvrD Location: 3790055-379132 1 bp Feature: domain Description: UvrD Location: 3791393-3791717 bp Feature: domain Description: UvrD Location: 3791393-3791717 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HNH_2 (pfam13391), Tra5 (COG2801), RVT-GII, GIIM (pfam08388), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), UvrD (COG0210)