myRT

myRT report for GCA_001030285.1_Esch_coli_BWH59_V1

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Seq: KQ087632.1 Escherichia coli strain BWH59 genomic scaffold aetzQ-supercont1.8, whole genome shotgun sequence (116506 bp)
Overview 1 RT 1: 161-4784 bp 2 RT 2: 99683-103507 bp Neighborhood of RT #1 [161, 4792] PRK08181 rve RVT-GII PRK10173 PRK10173 Neighborhood of RT #2 [99683, 103509] InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 161-916 bp Ori: KLX10290.1 Feature: domain Description: PRK08181 Location: 185-896 bp Feature: domain Description: PRK081 81 Location: 1 85-896 bp Feature: gene Location: 913-2412 bp Ori: KLX10291.1 Feature: domain Description: rve Location: 1285-1678 bp Feature: domain Description: rve Location: 1 285-1 678 bp Feature: gene Location: 3506-4009 bp Ori: KLX10292.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3779-3848 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3779-3848 bp Feature: gene Location: 4048-4368 bp Ori: KLX10293.1 Feature: domain Description: PRK10173 Location: 4051-4279 bp Feature: domain Description: PRK1 01 73 Location: 4051 -4279 bp Feature: gene Location: 4343-4792 bp Ori: KLX10294.1 Feature: domain Description: PRK10173 Location: 4346-4784 bp Feature: domain Description: PRK1 01 73 Location: 4346-4784 bp Feature: gene Location: 99683-100087 bp Ori: KLX10226.1 Feature: domain Description: InsE Location: 99713-100049 bp Feature: domain Description: InsE Location: 9971 3-1 00049 bp Feature: gene Location: 100116-100472 bp Ori: KLX10227.1 Feature: domain Description: PHA02517 Location: 100119-100428 bp Feature: domain Description: PHA0251 7 Location: 1 001 1 9-1 00428 bp Feature: gene Location: 100589-102112 bp Ori: KLX10228.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100862-101594 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 00862-1 01 594 bp Feature: domain Description: GIIM Note: maturase Location: 101669-101867 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 669-1 01 867 bp Feature: gene Location: 102704-103183 bp Ori: KLX10229.1 Feature: domain Description: PHA02517 Location: 102764-103118 bp Feature: domain Description: PHA0251 7 Location: 1 02764-1 031 1 8 bp Feature: gene Location: 103183-103509 bp Ori: KLX10230.1 Feature: domain Description: InsE Location: 103186-103507 bp Feature: domain Description: InsE Location: 1 031 86-1 03507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08181 (transposase; Validated), rve (pfam00665), RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)