myRT

myRT report for GCA_001030505.1_Esch_coli_BIDMC101_V1

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Seq: KQ087898.1 Escherichia coli strain BIDMC101 genomic scaffold aetAo-supercont1.4, whole genome shotgun sequence (436606 bp)
Overview 1 RT 1: 398907-404942 bp Neighborhood of RT #1 [398907, 404942] phage_tail_N Phage_fiber_2 Phage_fiber_2 Phage_fiber_2 Collar Phage_fiber Phage_fiber Phage_fiber Phage_fiber Caudo_TAP RVT-UG17 SLATT_5 Feature: gene Location: 398907-401882 bp Ori: KLX50656.1 Feature: domain Description: phage_tail_N Location: 398910-399309 bp Feature: domain Description: phage_tail_N Location: 39891 0-399309 bp Feature: domain Description: Phage_fiber_2 Location: 400293-400413 bp Feature: domain Description: Phage_fiber_2 Location: 400293-40041 3 bp Feature: domain Description: Phage_fiber_2 Location: 400425-400545 bp Feature: domain Description: Phage_fiber_2 Location: 400425-400545 bp Feature: domain Description: Phage_fiber_2 Location: 400557-400674 bp Feature: domain Description: Phage_fiber_2 Location: 400557-400674 bp Feature: domain Description: Collar Location: 401190-401328 bp Feature: domain Description: Collar Location: 401 1 90-401 328 bp Feature: domain Description: Phage_fiber Location: 401379-401418 bp Feature: domain Description: Phage_fiber Location: 401 379-401 41 8 bp Feature: domain Description: Phage_fiber Location: 401475-401514 bp Feature: domain Description: Phage_fiber Location: 401 475-401 51 4 bp Feature: domain Description: Phage_fiber Location: 401688-401724 bp Feature: domain Description: Phage_fiber Location: 401 688-401 724 bp Feature: domain Description: Phage_fiber Location: 401730-401763 bp Feature: domain Description: Phage_fiber Location: 401 730-401 763 bp Feature: gene Location: 401882-402466 bp Ori: KLX50657.1 Feature: domain Description: Caudo_TAP Location: 402098-402455 bp Feature: domain Description: Caudo_TAP Location: 402098-402455 bp Feature: gene Location: 402579-403949 bp Ori: KLX50658.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 402807-403413 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 402807-40341 3 bp Feature: gene Location: 403927-404478 bp Ori: KLX50659.1 Feature: domain Description: SLATT_5 Location: 403936-404449 bp Feature: domain Description: SLATT_5 Location: 403936-404449 bp Feature: gene Location: 404844-404942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT phage_tail_N (pfam08400), Phage_fiber_2 (pfam03406), Collar (pfam07484), Phage_fiber (pfam03335), Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160)