myRT

myRT report for GCA_001030715.1_Kleb_oxyt_CHS153_V1

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Seq: KQ088012.1 Klebsiella pneumoniae strain CHS153 genomic scaffold aetzk-supercont1.2, whole genome shotgun sequence (1442822 bp)
Overview 1 RT 1: 887955-894438 bp Neighborhood of RT #1 [887955, 894440] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 887955-889013 bp Feature: domain Description: YccC Location: 887961-888999 bp Feature: domain Description: YccC Location: 887961 -888999 bp Feature: gene Location: 889112-889585 bp Feature: domain Description: PRK10016 Location: 889115-889574 bp Feature: domain Description: PRK1 001 6 Location: 8891 1 5-889574 bp Feature: gene Location: 889667-891154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890072-890762 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 890072-890762 bp Feature: gene Location: 891672-892835 bp Feature: domain Description: dacD Location: 891675-892830 bp Feature: domain Description: dacD Location: 891 675-892830 bp Feature: gene Location: 893016-894440 bp Feature: domain Description: SbcB Location: 893022-894438 bp Feature: domain Description: SbcB Location: 893022-894438 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088011.1 Klebsiella pneumoniae strain CHS153 genomic scaffold aetzk-supercont1.1, whole genome shotgun sequence (2714225 bp)
Overview 1 RT 1: 484751-490562 bp 2 RT 2: 668725-674089 bp 3 RT 3: 1004185-1009620 bp 4 RT 4: 1012616-1018227 bp 5 RT 5: 1457381-1460833 bp Neighborhood of RT #1 [484751, 490618] umuC PRK10276 RVT-GII PinE Rve Neighborhood of RT #2 [668725, 674145] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #3 [1004185, 1009697] DinI RVT-GII Phage_GPA dam Neighborhood of RT #4 [1012616, 1018247] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Neighborhood of RT #5 [1457381, 1460889] PRK10276 PRK10276 RVT-GII Laminin_G_3 Feature: gene Location: 484751-486016 bp Feature: domain Description: umuC Location: 484754-486014 bp Feature: domain Description: umuC Location: 484754-486014 bp Feature: gene Location: 486018-486524 bp Feature: domain Description: PRK10276 Location: 486108-486519 bp Feature: domain Description: PRK102 76 Location: 486108-486519 bp Feature: gene Location: 486517-488004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 486922-487612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48692 2 -487612 bp Feature: gene Location: 489399-489848 bp Feature: domain Description: PinE Location: 489408-489840 bp Feature: domain Description: PinE Location: 489408-489840 bp Feature: gene Location: 489914-490618 bp Feature: domain Description: Rve Location: 489917-490562 bp Feature: domain Description: Rve Location: 489917-490562 bp Feature: gene Location: 668725-669990 bp Feature: domain Description: umuC Location: 668728-669988 bp Feature: domain Description: umuC Location: 66872 8-669988 bp Feature: gene Location: 669993-670412 bp Feature: domain Description: PRK10276 Location: 669996-670407 bp Feature: domain Description: PRK102 76 Location: 669996-670407 bp Feature: gene Location: 670491-671978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670896-671586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 670896-671586 bp Feature: gene Location: 672593-672835 bp Feature: domain Description: DinI Location: 672644-672824 bp Feature: domain Description: DinI Location: 672 644-672 82 4 bp Feature: gene Location: 673006-674145 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 673189-674089 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 673189-674089 bp Feature: gene Location: 1004185-1004418 bp Feature: domain Description: DinI Location: 1004227-1004413 bp Feature: domain Description: DinI Location: 10042 2 7-1004413 bp Feature: gene Location: 1004429-1004617 bp Feature: gene Location: 1004718-1006205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1005123-1005813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100512 3-1005813 bp Feature: gene Location: 1006681-1009095 bp Feature: domain Description: Phage_GPA Location: 1007245-1008211 bp Feature: domain Description: Phage_GPA Location: 10072 45-10082 11 bp Feature: gene Location: 1009092-1009697 bp Feature: domain Description: dam Location: 1009098-1009620 bp Feature: domain Description: dam Location: 1009098-100962 0 bp Feature: gene Location: 1012616-1013551 bp Feature: domain Description: Phage_CI_repr Location: 1012700-1012883 bp Feature: domain Description: Phage_CI_repr Location: 1012 700-1012 883 bp Feature: domain Description: Phage_CI_repr Location: 1013012-1013204 bp Feature: domain Description: Phage_CI_repr Location: 1013012 -10132 04 bp Feature: domain Description: Phage_CI_C Location: 1013231-1013525 bp Feature: domain Description: Phage_CI_C Location: 10132 31-101352 5 bp Feature: gene Location: 1013563-1014507 bp Feature: gene Location: 1014606-1016093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1015011-1015701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1015011-1015701 bp Feature: gene Location: 1016509-1017561 bp Feature: domain Description: int Location: 1016512-1017511 bp Feature: domain Description: int Location: 1016512 -1017511 bp Feature: gene Location: 1017684-1018247 bp Feature: domain Description: YbjK Location: 1017690-1018227 bp Feature: domain Description: YbjK Location: 1017690-10182 2 7 bp Feature: gene Location: 1457381-1457698 bp Feature: domain Description: PRK10276 Location: 1457387-1457501 bp Feature: domain Description: PRK102 76 Location: 1457387-1457501 bp Feature: domain Description: PRK10276 Location: 1457528-1457597 bp Feature: domain Description: PRK102 76 Location: 145752 8-1457597 bp Feature: gene Location: 1457698-1457937 bp Feature: gene Location: 1458015-1459502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1458420-1459110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 145842 0-1459110 bp Feature: gene Location: 1459952-1460161 bp Feature: gene Location: 1460158-1460889 bp Feature: domain Description: Laminin_G_3 Location: 1460479-1460833 bp Feature: domain Description: Laminin_G_3 Location: 1460479-1460833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, PinE (COG1961), Rve (COG3316), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), Phage_GPA (pfam05840), dam (TIGR00571), Phage_CI_repr (pfam07022)
Phage_CI_C (pfam16452), int (PHA02601), YbjK (COG3226), Laminin_G_3 (pfam13385)