myRT

myRT report for GCA_001030795.1_Kleb_pneu_CHS81_V1

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Seq: KQ088041.1 Klebsiella pneumoniae strain CHS81 genomic scaffold aetyQ-supercont1.3, whole genome shotgun sequence (162541 bp)
Overview 1 RT 1: 84158-89152 bp Neighborhood of RT #1 [84158, 89154] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 84158-85429 bp Feature: domain Description: umuC Location: 84161-85424 bp Feature: domain Description: umuC Location: 841 61 -85424 bp Feature: gene Location: 85429-85854 bp Feature: domain Description: PRK10276 Location: 85432-85840 bp Feature: domain Description: PRK1 0276 Location: 85432-85840 bp Feature: gene Location: 86257-87744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86662-87352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86662-87352 bp Feature: gene Location: 87978-88208 bp Feature: gene Location: 88729-89154 bp Feature: domain Description: Antirestrict Location: 88864-89152 bp Feature: domain Description: Antirestrict Location: 88864-891 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088042.1 Klebsiella pneumoniae strain CHS81 genomic scaffold aetyQ-supercont1.4, whole genome shotgun sequence (65110 bp)
Overview 1 RT 1: 10864-16217 bp Neighborhood of RT #1 [10864, 16354] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 10864-12135 bp Feature: domain Description: umuC Location: 10867-12127 bp Feature: domain Description: umuC Location: 10867-12 12 7 bp Feature: gene Location: 12135-12566 bp Feature: domain Description: PRK10276 Location: 12186-12549 bp Feature: domain Description: PRK102 76 Location: 12 186-12 549 bp Feature: gene Location: 12649-14136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13054-13744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13054-13744 bp Feature: gene Location: 14709-15680 bp Feature: domain Description: StbA Location: 14712-15657 bp Feature: domain Description: StbA Location: 14712 -15657 bp Feature: gene Location: 15683-16354 bp Feature: domain Description: Plasmid_stab_B Location: 15698-15905 bp Feature: domain Description: Plasmid_stab_B Location: 15698-15905 bp Feature: domain Description: Plasmid_stab_B Location: 16010-16217 bp Feature: domain Description: Plasmid_stab_B Location: 16010-162 17 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ088040.1 Klebsiella pneumoniae strain CHS81 genomic scaffold aetyQ-supercont1.2, whole genome shotgun sequence (2037667 bp)
Overview 1 RT 1: 583192-586599 bp 2 RT 2: 1025832-1031437 bp 3 RT 3: 1369117-1374535 bp 4 RT 4: 1552644-1558509 bp Neighborhood of RT #1 [583192, 586700] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025832, 1031463] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369117, 1374537] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1552644, 1558511] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583192-583923 bp Feature: domain Description: Laminin_G_3 Location: 583513-583867 bp Feature: domain Description: Laminin_G_3 Location: 583 513 -583 867 bp Feature: gene Location: 583920-584129 bp Feature: gene Location: 584579-586066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584984-585674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584984-585674 bp Feature: gene Location: 586144-586383 bp Feature: gene Location: 586383-586700 bp Feature: domain Description: PRK10276 Location: 586389-586503 bp Feature: domain Description: PRK10276 Location: 5863 89-586503 bp Feature: domain Description: PRK10276 Location: 586530-586599 bp Feature: domain Description: PRK10276 Location: 58653 0-586599 bp Feature: gene Location: 1025832-1026395 bp Feature: domain Description: YbjK Location: 1025838-1026375 bp Feature: domain Description: YbjK Location: 102583 8-10263 75 bp Feature: gene Location: 1026518-1027570 bp Feature: domain Description: int Location: 1026521-1027520 bp Feature: domain Description: int Location: 1026521-1027520 bp Feature: gene Location: 1027986-1029473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028391-1029081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10283 91-1029081 bp Feature: gene Location: 1029572-1030516 bp Feature: gene Location: 1030528-1031463 bp Feature: domain Description: Phage_CI_repr Location: 1030612-1030795 bp Feature: domain Description: Phage_CI_repr Location: 103 0612-103 0795 bp Feature: domain Description: Phage_CI_repr Location: 1030924-1031116 bp Feature: domain Description: Phage_CI_repr Location: 103 0924-103 1116 bp Feature: domain Description: Phage_CI_C Location: 1031143-1031437 bp Feature: domain Description: Phage_CI_C Location: 103 1143 -103 143 7 bp Feature: gene Location: 1369117-1370256 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369300-1370200 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 693 00-13 70200 bp Feature: gene Location: 1370427-1370669 bp Feature: domain Description: DinI Location: 1370478-1370658 bp Feature: domain Description: DinI Location: 13 70478-13 70658 bp Feature: gene Location: 1371284-1372771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371689-1372379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 71689-13 723 79 bp Feature: gene Location: 1372850-1373269 bp Feature: domain Description: PRK10276 Location: 1372853-1373264 bp Feature: domain Description: PRK10276 Location: 13 72853 -13 73 264 bp Feature: gene Location: 1373272-1374537 bp Feature: domain Description: umuC Location: 1373275-1374535 bp Feature: domain Description: umuC Location: 13 73 275-13 7453 5 bp Feature: gene Location: 1552644-1553348 bp Feature: domain Description: Rve Location: 1552647-1553292 bp Feature: domain Description: Rve Location: 1552647-1553 292 bp Feature: gene Location: 1553414-1553863 bp Feature: domain Description: PinE Location: 1553423-1553855 bp Feature: domain Description: PinE Location: 1553 423 -1553 855 bp Feature: gene Location: 1555258-1556745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555663-1556353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555663 -15563 53 bp Feature: gene Location: 1556738-1557244 bp Feature: domain Description: PRK10276 Location: 1556828-1557239 bp Feature: domain Description: PRK10276 Location: 1556828-155723 9 bp Feature: gene Location: 1557246-1558511 bp Feature: domain Description: umuC Location: 1557249-1558509 bp Feature: domain Description: umuC Location: 1557249-1558509 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ088039.1 Klebsiella pneumoniae strain CHS81 genomic scaffold aetyQ-supercont1.1, whole genome shotgun sequence (3529974 bp)
Overview 1 RT 1: 885279-891762 bp Neighborhood of RT #1 [885279, 891764] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 885279-886337 bp Feature: domain Description: YccC Location: 885285-886323 bp Feature: domain Description: YccC Location: 885285-886323 bp Feature: gene Location: 886436-886909 bp Feature: domain Description: PRK10016 Location: 886439-886898 bp Feature: domain Description: PRK10016 Location: 8864 39-886898 bp Feature: gene Location: 886991-888478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887396-888086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887396-888086 bp Feature: gene Location: 888996-890159 bp Feature: domain Description: dacD Location: 888999-890154 bp Feature: domain Description: dacD Location: 888999-890154 bp Feature: gene Location: 890340-891764 bp Feature: domain Description: SbcB Location: 890346-891762 bp Feature: domain Description: SbcB Location: 89034 6-891762 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)