myRT

myRT report for GCA_001030825.1_Kleb_pneu_CHS82_V1

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Seq: KQ088050.1 Klebsiella pneumoniae strain CHS82 genomic scaffold aetyI-supercont1.2, whole genome shotgun sequence (1861528 bp)
Overview 1 RT 1: 581987-585394 bp 2 RT 2: 1024745-1030350 bp 3 RT 3: 1367839-1373257 bp 4 RT 4: 1551366-1557231 bp Neighborhood of RT #1 [581987, 585495] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1024745, 1030376] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1367839, 1373259] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1551366, 1557233] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 581987-582718 bp Feature: domain Description: Laminin_G_3 Location: 582308-582662 bp Feature: domain Description: Laminin_G_3 Location: 582308-582662 bp Feature: gene Location: 582715-582924 bp Feature: gene Location: 583374-584861 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583779-584469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 583779-584469 bp Feature: gene Location: 584939-585178 bp Feature: gene Location: 585178-585495 bp Feature: domain Description: PRK10276 Location: 585184-585298 bp Feature: domain Description: PRK1 0276 Location: 5851 84-585298 bp Feature: domain Description: PRK10276 Location: 585325-585394 bp Feature: domain Description: PRK1 0276 Location: 585325-585394 bp Feature: gene Location: 1024745-1025308 bp Feature: domain Description: YbjK Location: 1024751-1025288 bp Feature: domain Description: YbjK Location: 1 024751 -1 025288 bp Feature: gene Location: 1025431-1026483 bp Feature: domain Description: int Location: 1025434-1026433 bp Feature: domain Description: int Location: 1 025434-1 026433 bp Feature: gene Location: 1026899-1028386 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027304-1027994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 027304-1 027994 bp Feature: gene Location: 1028485-1029429 bp Feature: gene Location: 1029441-1030376 bp Feature: domain Description: Phage_CI_repr Location: 1029525-1029708 bp Feature: domain Description: Phage_CI_repr Location: 1 029525-1 029708 bp Feature: domain Description: Phage_CI_repr Location: 1029837-1030029 bp Feature: domain Description: Phage_CI_repr Location: 1 029837-1 030029 bp Feature: domain Description: Phage_CI_C Location: 1030056-1030350 bp Feature: domain Description: Phage_CI_C Location: 1 030056-1 030350 bp Feature: gene Location: 1367839-1368978 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1368022-1368922 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 368022-1 368922 bp Feature: gene Location: 1369149-1369391 bp Feature: domain Description: DinI Location: 1369200-1369380 bp Feature: domain Description: DinI Location: 1 369200-1 369380 bp Feature: gene Location: 1370006-1371493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370411-1371101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 37041 1 -1 371 1 01 bp Feature: gene Location: 1371572-1371991 bp Feature: domain Description: PRK10276 Location: 1371575-1371986 bp Feature: domain Description: PRK1 0276 Location: 1 371 575-1 371 986 bp Feature: gene Location: 1371994-1373259 bp Feature: domain Description: umuC Location: 1371997-1373257 bp Feature: domain Description: umuC Location: 1 371 997-1 373257 bp Feature: gene Location: 1551366-1552070 bp Feature: domain Description: Rve Location: 1551369-1552014 bp Feature: domain Description: Rve Location: 1 551 369-1 55201 4 bp Feature: gene Location: 1552136-1552585 bp Feature: domain Description: PinE Location: 1552145-1552577 bp Feature: domain Description: PinE Location: 1 5521 45-1 552577 bp Feature: gene Location: 1553980-1555467 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1554385-1555075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 554385-1 555075 bp Feature: gene Location: 1555460-1555966 bp Feature: domain Description: PRK10276 Location: 1555550-1555961 bp Feature: domain Description: PRK1 0276 Location: 1 555550-1 555961 bp Feature: gene Location: 1555968-1557233 bp Feature: domain Description: umuC Location: 1555971-1557231 bp Feature: domain Description: umuC Location: 1 555971 -1 557231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ088052.1 Klebsiella pneumoniae strain CHS82 genomic scaffold aetyI-supercont1.4, whole genome shotgun sequence (162762 bp)
Overview 1 RT 1: 82518-87512 bp Neighborhood of RT #1 [82518, 87514] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82518-83789 bp Feature: domain Description: umuC Location: 82521-83784 bp Feature: domain Description: umuC Location: 82 52 1-83784 bp Feature: gene Location: 83789-84214 bp Feature: domain Description: PRK10276 Location: 83792-84200 bp Feature: domain Description: PRK102 76 Location: 83792 -842 00 bp Feature: gene Location: 84617-86104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 85022-85712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8502 2 -85712 bp Feature: gene Location: 86338-86568 bp Feature: gene Location: 87089-87514 bp Feature: domain Description: Antirestrict Location: 87224-87512 bp Feature: domain Description: Antirestrict Location: 872 2 4-87512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088049.1 Klebsiella pneumoniae strain CHS82 genomic scaffold aetyI-supercont1.1, whole genome shotgun sequence (2974767 bp)
Overview 1 RT 1: 1064146-1070629 bp Neighborhood of RT #1 [1064146, 1070631] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1064146-1065204 bp Feature: domain Description: YccC Location: 1064152-1065190 bp Feature: domain Description: YccC Location: 1064152-1065190 bp Feature: gene Location: 1065303-1065776 bp Feature: domain Description: PRK10016 Location: 1065306-1065765 bp Feature: domain Description: PRK10016 Location: 10653 06-1065765 bp Feature: gene Location: 1065858-1067345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1066263-1066953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1066263 -1066953 bp Feature: gene Location: 1067863-1069026 bp Feature: domain Description: dacD Location: 1067866-1069021 bp Feature: domain Description: dacD Location: 1067866-1069021 bp Feature: gene Location: 1069207-1070631 bp Feature: domain Description: SbcB Location: 1069213-1070629 bp Feature: domain Description: SbcB Location: 1069213 -1070629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088054.1 Klebsiella pneumoniae strain CHS82 genomic scaffold aetyI-supercont1.6, whole genome shotgun sequence (85573 bp)
Overview 1 RT 1: 29970-35323 bp Neighborhood of RT #1 [29970, 35460] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 29970-31241 bp Feature: domain Description: umuC Location: 29973-31233 bp Feature: domain Description: umuC Location: 29973-31233 bp Feature: gene Location: 31241-31672 bp Feature: domain Description: PRK10276 Location: 31292-31655 bp Feature: domain Description: PRK10276 Location: 31292-31655 bp Feature: gene Location: 31755-33242 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32160-32850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32160-32850 bp Feature: gene Location: 33815-34786 bp Feature: domain Description: StbA Location: 33818-34763 bp Feature: domain Description: StbA Location: 33818-34 763 bp Feature: gene Location: 34789-35460 bp Feature: domain Description: Plasmid_stab_B Location: 34804-35011 bp Feature: domain Description: Plasmid_stab_B Location: 34 804 -35011 bp Feature: domain Description: Plasmid_stab_B Location: 35116-35323 bp Feature: domain Description: Plasmid_stab_B Location: 35116-35323 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)