myRT

myRT report for GCA_001030835.1_Kleb_pneu_CHS83_V1

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Seq: KQ088061.1 Klebsiella pneumoniae strain CHS83 genomic scaffold aeurk-supercont1.5, whole genome shotgun sequence (60389 bp)
Overview 1 RT 1: 2805-7799 bp Neighborhood of RT #1 [2805, 7801] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 2805-4076 bp Feature: domain Description: umuC Location: 2808-4071 bp Feature: domain Description: umuC Location: 2808-4071 bp Feature: gene Location: 4076-4501 bp Feature: domain Description: PRK10276 Location: 4079-4487 bp Feature: domain Description: PRK1 0276 Location: 4079-4487 bp Feature: gene Location: 4904-6391 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5309-5999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5309-5999 bp Feature: gene Location: 6625-6855 bp Feature: gene Location: 7376-7801 bp Feature: domain Description: Antirestrict Location: 7511-7799 bp Feature: domain Description: Antirestrict Location: 751 1 -7799 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088058.1 Klebsiella pneumoniae strain CHS83 genomic scaffold aeurk-supercont1.2, whole genome shotgun sequence (1958838 bp)
Overview 1 RT 1: 983300-987338 bp 2 RT 2: 1327097-1332515 bp Neighborhood of RT #1 [983300, 987338] YbjK int RVT-GII Neighborhood of RT #2 [1327097, 1332517] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 983300-983863 bp Feature: domain Description: YbjK Location: 983306-983843 bp Feature: domain Description: YbjK Location: 983306-983843 bp Feature: gene Location: 983986-985038 bp Feature: domain Description: int Location: 983989-984988 bp Feature: domain Description: int Location: 983989-984988 bp Feature: gene Location: 985454-986356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 985859-986357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 985859-986357 bp Feature: gene Location: 986730-986926 bp Feature: gene Location: 987081-987338 bp Feature: gene Location: 1327097-1328236 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1327280-1328180 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 132 72 80-132 8180 bp Feature: gene Location: 1328407-1328649 bp Feature: domain Description: DinI Location: 1328458-1328638 bp Feature: domain Description: DinI Location: 132 8458-132 8638 bp Feature: gene Location: 1329264-1330751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1329669-1330359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 9669-1330359 bp Feature: gene Location: 1330830-1331249 bp Feature: domain Description: PRK10276 Location: 1330833-1331244 bp Feature: domain Description: PRK102 76 Location: 1330833-13312 44 bp Feature: gene Location: 1331252-1332517 bp Feature: domain Description: umuC Location: 1331255-1332515 bp Feature: domain Description: umuC Location: 13312 55-1332 515 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ088057.1 Klebsiella pneumoniae strain CHS83 genomic scaffold aeurk-supercont1.1, whole genome shotgun sequence (3536975 bp)
Overview 1 RT 1: 886422-892390 bp Neighborhood of RT #1 [886422, 892392] PRK10016 RVT-GII dacD SbcB Feature: gene Location: 886422-886895 bp Feature: domain Description: PRK10016 Location: 886425-886884 bp Feature: domain Description: PRK10016 Location: 886425-886884 bp Feature: gene Location: 887256-887672 bp Feature: gene Location: 888416-889106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888821-889106 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888821-889106 bp Feature: gene Location: 889624-890787 bp Feature: domain Description: dacD Location: 889627-890782 bp Feature: domain Description: dacD Location: 889627-890782 bp Feature: gene Location: 890968-892392 bp Feature: domain Description: SbcB Location: 890974-892390 bp Feature: domain Description: SbcB Location: 890974-8923 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)