myRT

myRT report for GCA_001030845.1_Kleb_pneu_CHS84_V1

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Seq: KQ088070.1 Klebsiella pneumoniae strain CHS84 genomic scaffold aetgL-supercont1.3, whole genome shotgun sequence (956679 bp)
Overview 1 RT 1: 439805-445410 bp 2 RT 2: 784537-789955 bp Neighborhood of RT #1 [439805, 445436] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [784537, 789957] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 439805-440368 bp Feature: domain Description: YbjK Location: 439811-440348 bp Feature: domain Description: YbjK Location: 43981 1 -440348 bp Feature: gene Location: 440491-441543 bp Feature: domain Description: int Location: 440494-441493 bp Feature: domain Description: int Location: 440494-441 493 bp Feature: gene Location: 441959-443446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442364-443054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442364-443054 bp Feature: gene Location: 443545-444489 bp Feature: gene Location: 444501-445436 bp Feature: domain Description: Phage_CI_repr Location: 444585-444768 bp Feature: domain Description: Phage_CI_repr Location: 444585-444768 bp Feature: domain Description: Phage_CI_repr Location: 444897-445089 bp Feature: domain Description: Phage_CI_repr Location: 444897-445089 bp Feature: domain Description: Phage_CI_C Location: 445116-445410 bp Feature: domain Description: Phage_CI_C Location: 4451 1 6-44541 0 bp Feature: gene Location: 784537-785676 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 784720-785620 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 784720-785620 bp Feature: gene Location: 785847-786089 bp Feature: domain Description: DinI Location: 785898-786078 bp Feature: domain Description: DinI Location: 785898-786078 bp Feature: gene Location: 786704-788191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 787109-787799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7871 09-787799 bp Feature: gene Location: 788270-788689 bp Feature: domain Description: PRK10276 Location: 788273-788684 bp Feature: domain Description: PRK1 0276 Location: 788273-788684 bp Feature: gene Location: 788692-789957 bp Feature: domain Description: umuC Location: 788695-789955 bp Feature: domain Description: umuC Location: 788695-789955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ088069.1 Klebsiella pneumoniae strain CHS84 genomic scaffold aetgL-supercont1.2, whole genome shotgun sequence (1435093 bp)
Overview 1 RT 1: 883257-889740 bp Neighborhood of RT #1 [883257, 889742] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883257-884315 bp Feature: domain Description: YccC Location: 883263-884301 bp Feature: domain Description: YccC Location: 8832 63-884301 bp Feature: gene Location: 884414-884887 bp Feature: domain Description: PRK10016 Location: 884417-884876 bp Feature: domain Description: PRK10016 Location: 884417-884876 bp Feature: gene Location: 884969-886456 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885374-886064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885374-886064 bp Feature: gene Location: 886974-888137 bp Feature: domain Description: dacD Location: 886977-888132 bp Feature: domain Description: dacD Location: 886977-888132 bp Feature: gene Location: 888318-889742 bp Feature: domain Description: SbcB Location: 888324-889740 bp Feature: domain Description: SbcB Location: 88832 4-889740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088074.1 Klebsiella pneumoniae strain CHS84 genomic scaffold aetgL-supercont1.7, whole genome shotgun sequence (200731 bp)
Overview 1 RT 1: 140850-145844 bp Neighborhood of RT #1 [140850, 145846] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 140850-142121 bp Feature: domain Description: umuC Location: 140853-142116 bp Feature: domain Description: umuC Location: 140853 -142116 bp Feature: gene Location: 142121-142546 bp Feature: domain Description: PRK10276 Location: 142124-142532 bp Feature: domain Description: PRK10276 Location: 142124-14253 2 bp Feature: gene Location: 142949-144436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143354-144044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 3 54-144044 bp Feature: gene Location: 144670-144900 bp Feature: gene Location: 145421-145846 bp Feature: domain Description: Antirestrict Location: 145556-145844 bp Feature: domain Description: Antirestrict Location: 145556-145844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)