myRT

myRT report for GCA_001030935.1_Kleb_pneu_CHS90_V1

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Seq: KQ088107.1 Klebsiella pneumoniae strain CHS90 genomic scaffold aetAH-supercont1.3, whole genome shotgun sequence (168190 bp)
Overview 1 RT 1: 77931-82925 bp Neighborhood of RT #1 [77931, 82927] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 77931-79202 bp Feature: domain Description: umuC Location: 77934-79197 bp Feature: domain Description: umuC Location: 77934-791 97 bp Feature: gene Location: 79202-79627 bp Feature: domain Description: PRK10276 Location: 79205-79613 bp Feature: domain Description: PRK1 0276 Location: 79205-7961 3 bp Feature: gene Location: 80030-81517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80435-81125 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80435-81 1 25 bp Feature: gene Location: 81751-81981 bp Feature: gene Location: 82502-82927 bp Feature: domain Description: Antirestrict Location: 82637-82925 bp Feature: domain Description: Antirestrict Location: 82637-82925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088108.1 Klebsiella pneumoniae strain CHS90 genomic scaffold aetAH-supercont1.4, whole genome shotgun sequence (65299 bp)
Overview 1 RT 1: 14440-19793 bp Neighborhood of RT #1 [14440, 19930] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 14440-15711 bp Feature: domain Description: umuC Location: 14443-15703 bp Feature: domain Description: umuC Location: 14443-15703 bp Feature: gene Location: 15711-16142 bp Feature: domain Description: PRK10276 Location: 15762-16125 bp Feature: domain Description: PRK102 76 Location: 15762 -1612 5 bp Feature: gene Location: 16225-17712 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16630-17320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16630-1732 0 bp Feature: gene Location: 18285-19256 bp Feature: domain Description: StbA Location: 18288-19233 bp Feature: domain Description: StbA Location: 182 88-192 33 bp Feature: gene Location: 19259-19930 bp Feature: domain Description: Plasmid_stab_B Location: 19274-19481 bp Feature: domain Description: Plasmid_stab_B Location: 192 74-19481 bp Feature: domain Description: Plasmid_stab_B Location: 19586-19793 bp Feature: domain Description: Plasmid_stab_B Location: 19586-19793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ088105.1 Klebsiella pneumoniae strain CHS90 genomic scaffold aetAH-supercont1.1, whole genome shotgun sequence (5024275 bp)
Overview 1 RT 1: 978031-983636 bp 2 RT 2: 1321317-1326735 bp 3 RT 3: 1506704-1512569 bp 4 RT 4: 2876203-2882686 bp Neighborhood of RT #1 [978031, 983662] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1321317, 1326737] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1506704, 1512571] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #4 [2876203, 2882688] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 978031-978594 bp Feature: domain Description: YbjK Location: 978037-978574 bp Feature: domain Description: YbjK Location: 97803 7-978574 bp Feature: gene Location: 978717-979769 bp Feature: domain Description: int Location: 978720-979719 bp Feature: domain Description: int Location: 978720-979719 bp Feature: gene Location: 980185-981672 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 980590-981280 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 980590-981280 bp Feature: gene Location: 981771-982715 bp Feature: gene Location: 982727-983662 bp Feature: domain Description: Phage_CI_repr Location: 982811-982994 bp Feature: domain Description: Phage_CI_repr Location: 982811-982994 bp Feature: domain Description: Phage_CI_repr Location: 983123-983315 bp Feature: domain Description: Phage_CI_repr Location: 983 123 -983 3 15 bp Feature: domain Description: Phage_CI_C Location: 983342-983636 bp Feature: domain Description: Phage_CI_C Location: 983 3 42-983 63 6 bp Feature: gene Location: 1321317-1322456 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1321500-1322400 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 21500-13 22400 bp Feature: gene Location: 1322627-1322869 bp Feature: domain Description: DinI Location: 1322678-1322858 bp Feature: domain Description: DinI Location: 13 22678-13 22858 bp Feature: gene Location: 1323484-1324971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1323889-1324579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 23 889-13 24579 bp Feature: gene Location: 1325050-1325469 bp Feature: domain Description: PRK10276 Location: 1325053-1325464 bp Feature: domain Description: PRK10276 Location: 13 25053 -13 25464 bp Feature: gene Location: 1325472-1326737 bp Feature: domain Description: umuC Location: 1325475-1326735 bp Feature: domain Description: umuC Location: 13 25475-13 2673 5 bp Feature: gene Location: 1506704-1507408 bp Feature: domain Description: Rve Location: 1506707-1507352 bp Feature: domain Description: Rve Location: 1506707-15073 52 bp Feature: gene Location: 1507474-1507923 bp Feature: domain Description: PinE Location: 1507483-1507915 bp Feature: domain Description: PinE Location: 1507483 -1507915 bp Feature: gene Location: 1509318-1510805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1509723-1510413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1509723 -1510413 bp Feature: gene Location: 1510798-1511304 bp Feature: domain Description: PRK10276 Location: 1510888-1511299 bp Feature: domain Description: PRK10276 Location: 1510888-1511299 bp Feature: gene Location: 1511306-1512571 bp Feature: domain Description: umuC Location: 1511309-1512569 bp Feature: domain Description: umuC Location: 15113 09-1512569 bp Feature: gene Location: 2876203-2877261 bp Feature: domain Description: YccC Location: 2876209-2877247 bp Feature: domain Description: YccC Location: 2876209-2877247 bp Feature: gene Location: 2877360-2877833 bp Feature: domain Description: PRK10016 Location: 2877363-2877822 bp Feature: domain Description: PRK10016 Location: 28773 63 -2877822 bp Feature: gene Location: 2877915-2879402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2878320-2879010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28783 20-2879010 bp Feature: gene Location: 2879920-2881083 bp Feature: domain Description: dacD Location: 2879923-2881078 bp Feature: domain Description: dacD Location: 2879923 -2881078 bp Feature: gene Location: 2881264-2882688 bp Feature: domain Description: SbcB Location: 2881270-2882686 bp Feature: domain Description: SbcB Location: 2881270-2882686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)