myRT

myRT report for GCA_001030945.1_Kleb_pneu_CHS91_V1

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Seq: KQ088115.1 Klebsiella pneumoniae strain CHS91 genomic scaffold aetyt-supercont1.2, whole genome shotgun sequence (2042756 bp)
Overview 1 RT 1: 582426-585833 bp 2 RT 2: 1025068-1030673 bp 3 RT 3: 1368278-1373696 bp 4 RT 4: 1554444-1560309 bp Neighborhood of RT #1 [582426, 585934] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025068, 1030699] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1368278, 1373698] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554444, 1560311] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 582426-583157 bp Feature: domain Description: Laminin_G_3 Location: 582747-583101 bp Feature: domain Description: Laminin_G_3 Location: 582747-5831 01 bp Feature: gene Location: 583154-583363 bp Feature: gene Location: 583813-585300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584218-584908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58421 8-584908 bp Feature: gene Location: 585378-585617 bp Feature: gene Location: 585617-585934 bp Feature: domain Description: PRK10276 Location: 585623-585737 bp Feature: domain Description: PRK1 0276 Location: 585623-585737 bp Feature: domain Description: PRK10276 Location: 585764-585833 bp Feature: domain Description: PRK1 0276 Location: 585764-585833 bp Feature: gene Location: 1025068-1025631 bp Feature: domain Description: YbjK Location: 1025074-1025611 bp Feature: domain Description: YbjK Location: 1 025074-1 02561 1 bp Feature: gene Location: 1025754-1026806 bp Feature: domain Description: int Location: 1025757-1026756 bp Feature: domain Description: int Location: 1 025757-1 026756 bp Feature: gene Location: 1027222-1028709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1027627-1028317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 027627-1 02831 7 bp Feature: gene Location: 1028808-1029752 bp Feature: gene Location: 1029764-1030699 bp Feature: domain Description: Phage_CI_repr Location: 1029848-1030031 bp Feature: domain Description: Phage_CI_repr Location: 1 029848-1 030031 bp Feature: domain Description: Phage_CI_repr Location: 1030160-1030352 bp Feature: domain Description: Phage_CI_repr Location: 1 0301 60-1 030352 bp Feature: domain Description: Phage_CI_C Location: 1030379-1030673 bp Feature: domain Description: Phage_CI_C Location: 1 030379-1 030673 bp Feature: gene Location: 1368278-1369417 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1368461-1369361 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 368461 -1 369361 bp Feature: gene Location: 1369588-1369830 bp Feature: domain Description: DinI Location: 1369639-1369819 bp Feature: domain Description: DinI Location: 1 369639-1 36981 9 bp Feature: gene Location: 1370445-1371932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370850-1371540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 370850-1 371 540 bp Feature: gene Location: 1372011-1372430 bp Feature: domain Description: PRK10276 Location: 1372014-1372425 bp Feature: domain Description: PRK1 0276 Location: 1 37201 4-1 372425 bp Feature: gene Location: 1372433-1373698 bp Feature: domain Description: umuC Location: 1372436-1373696 bp Feature: domain Description: umuC Location: 1 372436-1 373696 bp Feature: gene Location: 1554444-1555148 bp Feature: domain Description: Rve Location: 1554447-1555092 bp Feature: domain Description: Rve Location: 1 554447-1 555092 bp Feature: gene Location: 1555214-1555663 bp Feature: domain Description: PinE Location: 1555223-1555655 bp Feature: domain Description: PinE Location: 1 555223-1 555655 bp Feature: gene Location: 1557058-1558545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557463-1558153 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 557463-1 5581 53 bp Feature: gene Location: 1558538-1559044 bp Feature: domain Description: PRK10276 Location: 1558628-1559039 bp Feature: domain Description: PRK1 0276 Location: 1 558628-1 559039 bp Feature: gene Location: 1559046-1560311 bp Feature: domain Description: umuC Location: 1559049-1560309 bp Feature: domain Description: umuC Location: 1 559049-1 560309 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ088114.1 Klebsiella pneumoniae strain CHS91 genomic scaffold aetyt-supercont1.1, whole genome shotgun sequence (3396581 bp)
Overview 1 RT 1: 750534-757017 bp Neighborhood of RT #1 [750534, 757019] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 750534-751592 bp Feature: domain Description: YccC Location: 750540-751578 bp Feature: domain Description: YccC Location: 750540-751578 bp Feature: gene Location: 751691-752164 bp Feature: domain Description: PRK10016 Location: 751694-752153 bp Feature: domain Description: PRK10016 Location: 751694-752 153 bp Feature: gene Location: 752246-753733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752651-753341 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 651-753341 bp Feature: gene Location: 754251-755414 bp Feature: domain Description: dacD Location: 754254-755409 bp Feature: domain Description: dacD Location: 7542 54-755409 bp Feature: gene Location: 755595-757019 bp Feature: domain Description: SbcB Location: 755601-757017 bp Feature: domain Description: SbcB Location: 755601-757017 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088116.1 Klebsiella pneumoniae strain CHS91 genomic scaffold aetyt-supercont1.3, whole genome shotgun sequence (129641 bp)
Overview 1 RT 1: 111758-116752 bp Neighborhood of RT #1 [111758, 116754] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 111758-113029 bp Feature: domain Description: umuC Location: 111761-113024 bp Feature: domain Description: umuC Location: 111761-113 024 bp Feature: gene Location: 113029-113454 bp Feature: domain Description: PRK10276 Location: 113032-113440 bp Feature: domain Description: PRK10276 Location: 113 03 2-113 440 bp Feature: gene Location: 113857-115344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114262-114952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114262-114952 bp Feature: gene Location: 115578-115808 bp Feature: gene Location: 116329-116754 bp Feature: domain Description: Antirestrict Location: 116464-116752 bp Feature: domain Description: Antirestrict Location: 116464-116752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)