myRT

myRT report for GCA_001031015.1_Kleb_pneu_CHS94_V1

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Seq: KQ088141.1 Klebsiella pneumoniae strain CHS94 genomic scaffold aetyB-supercont1.2, whole genome shotgun sequence (1925561 bp)
Overview 1 RT 1: 586265-589672 bp 2 RT 2: 1028907-1034512 bp 3 RT 3: 1372198-1377616 bp 4 RT 4: 1555725-1561590 bp Neighborhood of RT #1 [586265, 589773] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1028907, 1034538] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1372198, 1377618] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1555725, 1561592] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 586265-586996 bp Feature: domain Description: Laminin_G_3 Location: 586586-586940 bp Feature: domain Description: Laminin_G_3 Location: 586586-586940 bp Feature: gene Location: 586993-587202 bp Feature: gene Location: 587652-589139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588057-588747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588057-588747 bp Feature: gene Location: 589217-589456 bp Feature: gene Location: 589456-589773 bp Feature: domain Description: PRK10276 Location: 589462-589576 bp Feature: domain Description: PRK1 0276 Location: 589462-589576 bp Feature: domain Description: PRK10276 Location: 589603-589672 bp Feature: domain Description: PRK1 0276 Location: 589603-589672 bp Feature: gene Location: 1028907-1029470 bp Feature: domain Description: YbjK Location: 1028913-1029450 bp Feature: domain Description: YbjK Location: 1 02891 3-1 029450 bp Feature: gene Location: 1029593-1030645 bp Feature: domain Description: int Location: 1029596-1030595 bp Feature: domain Description: int Location: 1 029596-1 030595 bp Feature: gene Location: 1031061-1032548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1031466-1032156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 031 466-1 0321 56 bp Feature: gene Location: 1032647-1033591 bp Feature: gene Location: 1033603-1034538 bp Feature: domain Description: Phage_CI_repr Location: 1033687-1033870 bp Feature: domain Description: Phage_CI_repr Location: 1 033687-1 033870 bp Feature: domain Description: Phage_CI_repr Location: 1033999-1034191 bp Feature: domain Description: Phage_CI_repr Location: 1 033999-1 0341 91 bp Feature: domain Description: Phage_CI_C Location: 1034218-1034512 bp Feature: domain Description: Phage_CI_C Location: 1 03421 8-1 03451 2 bp Feature: gene Location: 1372198-1373337 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372381-1373281 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 372381 -1 373281 bp Feature: gene Location: 1373508-1373750 bp Feature: domain Description: DinI Location: 1373559-1373739 bp Feature: domain Description: DinI Location: 1 373559-1 373739 bp Feature: gene Location: 1374365-1375852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374770-1375460 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 374770-1 375460 bp Feature: gene Location: 1375931-1376350 bp Feature: domain Description: PRK10276 Location: 1375934-1376345 bp Feature: domain Description: PRK1 0276 Location: 1 375934-1 376345 bp Feature: gene Location: 1376353-1377618 bp Feature: domain Description: umuC Location: 1376356-1377616 bp Feature: domain Description: umuC Location: 1 376356-1 37761 6 bp Feature: gene Location: 1555725-1556429 bp Feature: domain Description: Rve Location: 1555728-1556373 bp Feature: domain Description: Rve Location: 1 555728-1 556373 bp Feature: gene Location: 1556495-1556944 bp Feature: domain Description: PinE Location: 1556504-1556936 bp Feature: domain Description: PinE Location: 1 556504-1 556936 bp Feature: gene Location: 1558339-1559826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558744-1559434 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 558744-1 559434 bp Feature: gene Location: 1559819-1560325 bp Feature: domain Description: PRK10276 Location: 1559909-1560320 bp Feature: domain Description: PRK1 0276 Location: 1 559909-1 560320 bp Feature: gene Location: 1560327-1561592 bp Feature: domain Description: umuC Location: 1560330-1561590 bp Feature: domain Description: umuC Location: 1 560330-1 561 590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ088140.1 Klebsiella pneumoniae strain CHS94 genomic scaffold aetyB-supercont1.1, whole genome shotgun sequence (3021012 bp)
Overview 1 RT 1: 1011289-1017772 bp Neighborhood of RT #1 [1011289, 1017774] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1011289-1012347 bp Feature: domain Description: YccC Location: 1011295-1012333 bp Feature: domain Description: YccC Location: 10112 95-1012 333 bp Feature: gene Location: 1012446-1012919 bp Feature: domain Description: PRK10016 Location: 1012449-1012908 bp Feature: domain Description: PRK10016 Location: 1012 449-1012 908 bp Feature: gene Location: 1013001-1014488 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1013406-1014096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1013406-1014096 bp Feature: gene Location: 1015006-1016169 bp Feature: domain Description: dacD Location: 1015009-1016164 bp Feature: domain Description: dacD Location: 1015009-1016164 bp Feature: gene Location: 1016350-1017774 bp Feature: domain Description: SbcB Location: 1016356-1017772 bp Feature: domain Description: SbcB Location: 1016356-1017772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088143.1 Klebsiella pneumoniae strain CHS94 genomic scaffold aetyB-supercont1.4, whole genome shotgun sequence (138468 bp)
Overview 1 RT 1: 80884-85878 bp Neighborhood of RT #1 [80884, 85880] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 80884-82155 bp Feature: domain Description: umuC Location: 80887-82150 bp Feature: domain Description: umuC Location: 80887-82150 bp Feature: gene Location: 82155-82580 bp Feature: domain Description: PRK10276 Location: 82158-82566 bp Feature: domain Description: PRK10276 Location: 82158-82566 bp Feature: gene Location: 82983-84470 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83388-84078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 3 88-84078 bp Feature: gene Location: 84704-84934 bp Feature: gene Location: 85455-85880 bp Feature: domain Description: Antirestrict Location: 85590-85878 bp Feature: domain Description: Antirestrict Location: 85590-85878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)