myRT

myRT report for GCA_001031025.1_Kleb_pneu_CHS95_V1

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Seq: KQ088160.1 Klebsiella pneumoniae strain CHS95 genomic scaffold aetzc-supercont1.11, whole genome shotgun sequence (53831 bp)
Overview 1 RT 1: 10780-16133 bp Neighborhood of RT #1 [10780, 16270] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 10780-12051 bp Feature: domain Description: umuC Location: 10783-12043 bp Feature: domain Description: umuC Location: 1 0783-1 2043 bp Feature: gene Location: 12051-12482 bp Feature: domain Description: PRK10276 Location: 12102-12465 bp Feature: domain Description: PRK1 0276 Location: 1 21 02-1 2465 bp Feature: gene Location: 12565-14049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12967-13657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2967-1 3657 bp Feature: gene Location: 14625-15596 bp Feature: domain Description: StbA Location: 14628-15573 bp Feature: domain Description: StbA Location: 1 4628-1 5573 bp Feature: gene Location: 15599-16270 bp Feature: domain Description: Plasmid_stab_B Location: 15614-15821 bp Feature: domain Description: Plasmid_stab_B Location: 1 561 4-1 5821 bp Feature: domain Description: Plasmid_stab_B Location: 15926-16133 bp Feature: domain Description: Plasmid_stab_B Location: 1 5926-1 61 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ088150.1 Klebsiella pneumoniae strain CHS95 genomic scaffold aetzc-supercont1.1, whole genome shotgun sequence (2045752 bp)
Overview 1 RT 1: 586681-590088 bp 2 RT 2: 1029811-1035416 bp 3 RT 3: 1038361-1043868 bp 4 RT 4: 1375007-1380425 bp 5 RT 5: 1558534-1564399 bp Neighborhood of RT #1 [586681, 590189] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1029811, 1035442] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1038361, 1043873] dam Phage_GPA RVT-GII DinI Neighborhood of RT #4 [1375007, 1380427] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #5 [1558534, 1564401] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 586681-587412 bp Feature: domain Description: Laminin_G_3 Location: 586999-587356 bp Feature: domain Description: Laminin_G_3 Location: 586999-587356 bp Feature: gene Location: 587409-587618 bp Feature: gene Location: 588071-589555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588473-589163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 588473-589163 bp Feature: gene Location: 589633-589872 bp Feature: gene Location: 589872-590189 bp Feature: domain Description: PRK10276 Location: 589878-589992 bp Feature: domain Description: PRK102 76 Location: 589878-589992 bp Feature: domain Description: PRK10276 Location: 590019-590088 bp Feature: domain Description: PRK102 76 Location: 590019-590088 bp Feature: gene Location: 1029811-1030374 bp Feature: domain Description: YbjK Location: 1029817-1030354 bp Feature: domain Description: YbjK Location: 102 9817-1030354 bp Feature: gene Location: 1030497-1031549 bp Feature: domain Description: int Location: 1030500-1031499 bp Feature: domain Description: int Location: 1030500-1031499 bp Feature: gene Location: 1031968-1033452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032370-1033060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032 370-1033060 bp Feature: gene Location: 1033551-1034495 bp Feature: gene Location: 1034507-1035442 bp Feature: domain Description: Phage_CI_repr Location: 1034591-1034774 bp Feature: domain Description: Phage_CI_repr Location: 1034591-1034774 bp Feature: domain Description: Phage_CI_repr Location: 1034903-1035095 bp Feature: domain Description: Phage_CI_repr Location: 1034903-1035095 bp Feature: domain Description: Phage_CI_C Location: 1035122-1035416 bp Feature: domain Description: Phage_CI_C Location: 103512 2 -1035416 bp Feature: gene Location: 1038361-1038966 bp Feature: domain Description: dam Location: 1038367-1038889 bp Feature: domain Description: dam Location: 1038367-1038889 bp Feature: gene Location: 1038963-1041377 bp Feature: domain Description: Phage_GPA Location: 1039527-1040493 bp Feature: domain Description: Phage_GPA Location: 103952 7-1040493 bp Feature: gene Location: 1041856-1043340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042258-1042948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1042 2 58-1042 948 bp Feature: gene Location: 1043441-1043629 bp Feature: gene Location: 1043640-1043873 bp Feature: domain Description: DinI Location: 1043682-1043868 bp Feature: domain Description: DinI Location: 1043682 -1043868 bp Feature: gene Location: 1375007-1376146 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1375190-1376090 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1375190-1376090 bp Feature: gene Location: 1376317-1376559 bp Feature: domain Description: DinI Location: 1376368-1376548 bp Feature: domain Description: DinI Location: 1376368-1376548 bp Feature: gene Location: 1377177-1378661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377579-1378269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377579-13782 69 bp Feature: gene Location: 1378740-1379159 bp Feature: domain Description: PRK10276 Location: 1378743-1379154 bp Feature: domain Description: PRK102 76 Location: 1378743-1379154 bp Feature: gene Location: 1379162-1380427 bp Feature: domain Description: umuC Location: 1379165-1380425 bp Feature: domain Description: umuC Location: 1379165-138042 5 bp Feature: gene Location: 1558534-1559238 bp Feature: domain Description: Rve Location: 1558537-1559182 bp Feature: domain Description: Rve Location: 1558537-1559182 bp Feature: gene Location: 1559304-1559753 bp Feature: domain Description: PinE Location: 1559313-1559745 bp Feature: domain Description: PinE Location: 1559313-1559745 bp Feature: gene Location: 1561151-1562635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561553-1562243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561553-1562 2 43 bp Feature: gene Location: 1562628-1563134 bp Feature: domain Description: PRK10276 Location: 1562718-1563129 bp Feature: domain Description: PRK102 76 Location: 1562 718-156312 9 bp Feature: gene Location: 1563136-1564401 bp Feature: domain Description: umuC Location: 1563139-1564399 bp Feature: domain Description: umuC Location: 1563139-1564399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), Rve (COG3316), PinE (COG1961)

Seq: KQ088151.1 Klebsiella pneumoniae strain CHS95 genomic scaffold aetzc-supercont1.2, whole genome shotgun sequence (1267964 bp)
Overview 1 RT 1: 712020-718503 bp Neighborhood of RT #1 [712020, 718505] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 712020-713078 bp Feature: domain Description: YccC Location: 712026-713064 bp Feature: domain Description: YccC Location: 712026-713 064 bp Feature: gene Location: 713177-713650 bp Feature: domain Description: PRK10016 Location: 713180-713639 bp Feature: domain Description: PRK10016 Location: 713 180-713 63 9 bp Feature: gene Location: 713732-715216 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 714134-714824 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71413 4-714824 bp Feature: gene Location: 715737-716900 bp Feature: domain Description: dacD Location: 715740-716895 bp Feature: domain Description: dacD Location: 715740-716895 bp Feature: gene Location: 717081-718505 bp Feature: domain Description: SbcB Location: 717087-718503 bp Feature: domain Description: SbcB Location: 717087-718503 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088155.1 Klebsiella pneumoniae strain CHS95 genomic scaffold aetzc-supercont1.6, whole genome shotgun sequence (141314 bp)
Overview 1 RT 1: 82459-87453 bp Neighborhood of RT #1 [82459, 87455] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82459-83730 bp Feature: domain Description: umuC Location: 82462-83725 bp Feature: domain Description: umuC Location: 824 62-83725 bp Feature: gene Location: 83730-84155 bp Feature: domain Description: PRK10276 Location: 83733-84141 bp Feature: domain Description: PRK10276 Location: 83733-84 14 1 bp Feature: gene Location: 84561-86045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84963-85653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84 963-85653 bp Feature: gene Location: 86279-86509 bp Feature: gene Location: 87030-87455 bp Feature: domain Description: Antirestrict Location: 87165-87453 bp Feature: domain Description: Antirestrict Location: 87165-874 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)