myRT

myRT report for GCA_001031065.1_Kleb_pneu_CHS96_V1

Download annotations/find similar RTs

Seq: KQ088167.1 Klebsiella pneumoniae strain CHS96 genomic scaffold aetzo-supercont1.4, whole genome shotgun sequence (88291 bp)
Overview 1 RT 1: 32516-37869 bp Neighborhood of RT #1 [32516, 38006] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 32516-33787 bp Feature: domain Description: umuC Location: 32519-33779 bp Feature: domain Description: umuC Location: 3251 9-33779 bp Feature: gene Location: 33787-34218 bp Feature: domain Description: PRK10276 Location: 33838-34201 bp Feature: domain Description: PRK1 0276 Location: 33838-34201 bp Feature: gene Location: 34301-35788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34706-35396 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34706-35396 bp Feature: gene Location: 36361-37332 bp Feature: domain Description: StbA Location: 36364-37309 bp Feature: domain Description: StbA Location: 36364-37309 bp Feature: gene Location: 37335-38006 bp Feature: domain Description: Plasmid_stab_B Location: 37350-37557 bp Feature: domain Description: Plasmid_stab_B Location: 37350-37557 bp Feature: domain Description: Plasmid_stab_B Location: 37662-37869 bp Feature: domain Description: Plasmid_stab_B Location: 37662-37869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ088164.1 Klebsiella pneumoniae strain CHS96 genomic scaffold aetzo-supercont1.1, whole genome shotgun sequence (5494656 bp)
Overview 1 RT 1: 583334-586741 bp 2 RT 2: 1025974-1031579 bp 3 RT 3: 1369362-1374780 bp 4 RT 4: 1552889-1558754 bp 5 RT 5: 2967277-2973760 bp Neighborhood of RT #1 [583334, 586842] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025974, 1031605] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369362, 1374782] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1552889, 1558756] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2967277, 2973762] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583334-584065 bp Feature: domain Description: Laminin_G_3 Location: 583655-584009 bp Feature: domain Description: Laminin_G_3 Location: 583655-584009 bp Feature: gene Location: 584062-584271 bp Feature: gene Location: 584721-586208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585126-585816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58512 6-585816 bp Feature: gene Location: 586286-586525 bp Feature: gene Location: 586525-586842 bp Feature: domain Description: PRK10276 Location: 586531-586645 bp Feature: domain Description: PRK102 76 Location: 586531-586645 bp Feature: domain Description: PRK10276 Location: 586672-586741 bp Feature: domain Description: PRK102 76 Location: 586672 -586741 bp Feature: gene Location: 1025974-1026537 bp Feature: domain Description: YbjK Location: 1025980-1026517 bp Feature: domain Description: YbjK Location: 102 5980-102 6517 bp Feature: gene Location: 1026660-1027712 bp Feature: domain Description: int Location: 1026663-1027662 bp Feature: domain Description: int Location: 102 6663-102 7662 bp Feature: gene Location: 1028128-1029615 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028533-1029223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8533-102 92 2 3 bp Feature: gene Location: 1029714-1030658 bp Feature: gene Location: 1030670-1031605 bp Feature: domain Description: Phage_CI_repr Location: 1030754-1030937 bp Feature: domain Description: Phage_CI_repr Location: 1030754-1030937 bp Feature: domain Description: Phage_CI_repr Location: 1031066-1031258 bp Feature: domain Description: Phage_CI_repr Location: 1031066-10312 58 bp Feature: domain Description: Phage_CI_C Location: 1031285-1031579 bp Feature: domain Description: Phage_CI_C Location: 10312 85-1031579 bp Feature: gene Location: 1369362-1370501 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369545-1370445 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369545-1370445 bp Feature: gene Location: 1370672-1370914 bp Feature: domain Description: DinI Location: 1370723-1370903 bp Feature: domain Description: DinI Location: 137072 3-1370903 bp Feature: gene Location: 1371529-1373016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371934-1372624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371934-1372 62 4 bp Feature: gene Location: 1373095-1373514 bp Feature: domain Description: PRK10276 Location: 1373098-1373509 bp Feature: domain Description: PRK102 76 Location: 1373098-1373509 bp Feature: gene Location: 1373517-1374782 bp Feature: domain Description: umuC Location: 1373520-1374780 bp Feature: domain Description: umuC Location: 137352 0-1374780 bp Feature: gene Location: 1552889-1553593 bp Feature: domain Description: Rve Location: 1552892-1553537 bp Feature: domain Description: Rve Location: 1552 892 -1553537 bp Feature: gene Location: 1553659-1554108 bp Feature: domain Description: PinE Location: 1553668-1554100 bp Feature: domain Description: PinE Location: 1553668-1554100 bp Feature: gene Location: 1555503-1556990 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555908-1556598 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555908-1556598 bp Feature: gene Location: 1556983-1557489 bp Feature: domain Description: PRK10276 Location: 1557073-1557484 bp Feature: domain Description: PRK102 76 Location: 1557073-1557484 bp Feature: gene Location: 1557491-1558756 bp Feature: domain Description: umuC Location: 1557494-1558754 bp Feature: domain Description: umuC Location: 1557494-1558754 bp Feature: gene Location: 2967277-2968335 bp Feature: domain Description: YccC Location: 2967283-2968321 bp Feature: domain Description: YccC Location: 2 9672 83-2 96832 1 bp Feature: gene Location: 2968434-2968907 bp Feature: domain Description: PRK10016 Location: 2968437-2968896 bp Feature: domain Description: PRK10016 Location: 2 968437-2 968896 bp Feature: gene Location: 2968989-2970476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2969394-2970084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 969394-2 970084 bp Feature: gene Location: 2970994-2972157 bp Feature: domain Description: dacD Location: 2970997-2972152 bp Feature: domain Description: dacD Location: 2 970997-2 972 152 bp Feature: gene Location: 2972338-2973762 bp Feature: domain Description: SbcB Location: 2972344-2973760 bp Feature: domain Description: SbcB Location: 2 972 344-2 973760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088165.1 Klebsiella pneumoniae strain CHS96 genomic scaffold aetzo-supercont1.2, whole genome shotgun sequence (167338 bp)
Overview 1 RT 1: 87579-92573 bp Neighborhood of RT #1 [87579, 92575] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 87579-88850 bp Feature: domain Description: umuC Location: 87582-88845 bp Feature: domain Description: umuC Location: 87582-88845 bp Feature: gene Location: 88850-89275 bp Feature: domain Description: PRK10276 Location: 88853-89261 bp Feature: domain Description: PRK10276 Location: 88853 -89261 bp Feature: gene Location: 89678-91165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90083-90773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 90083 -90773 bp Feature: gene Location: 91399-91629 bp Feature: gene Location: 92150-92575 bp Feature: domain Description: Antirestrict Location: 92285-92573 bp Feature: domain Description: Antirestrict Location: 92285-92573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)