myRT

myRT report for GCA_001031075.1_Kleb_pneu_CHS97_V1

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Seq: KQ088171.1 Klebsiella pneumoniae strain CHS97 genomic scaffold aetgQ-supercont1.3, whole genome shotgun sequence (146261 bp)
Overview 1 RT 1: 88681-93675 bp Neighborhood of RT #1 [88681, 93677] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 88681-89952 bp Feature: domain Description: umuC Location: 88684-89947 bp Feature: domain Description: umuC Location: 88684-89947 bp Feature: gene Location: 89952-90377 bp Feature: domain Description: PRK10276 Location: 89955-90363 bp Feature: domain Description: PRK1 0276 Location: 89955-90363 bp Feature: gene Location: 90780-92267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91185-91875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 1 85-91 875 bp Feature: gene Location: 92501-92731 bp Feature: gene Location: 93252-93677 bp Feature: domain Description: Antirestrict Location: 93387-93675 bp Feature: domain Description: Antirestrict Location: 93387-93675 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088169.1 Klebsiella pneumoniae strain CHS97 genomic scaffold aetgQ-supercont1.1, whole genome shotgun sequence (3592103 bp)
Overview 1 RT 1: 942298-948781 bp Neighborhood of RT #1 [942298, 948783] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 942298-943356 bp Feature: domain Description: YccC Location: 942304-943342 bp Feature: domain Description: YccC Location: 942 304-943342 bp Feature: gene Location: 943455-943928 bp Feature: domain Description: PRK10016 Location: 943458-943917 bp Feature: domain Description: PRK10016 Location: 943458-943917 bp Feature: gene Location: 944010-945497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 944415-945105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 944415-945105 bp Feature: gene Location: 946015-947178 bp Feature: domain Description: dacD Location: 946018-947173 bp Feature: domain Description: dacD Location: 946018-947173 bp Feature: gene Location: 947359-948783 bp Feature: domain Description: SbcB Location: 947365-948781 bp Feature: domain Description: SbcB Location: 947365-948781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088170.1 Klebsiella pneumoniae strain CHS97 genomic scaffold aetgQ-supercont1.2, whole genome shotgun sequence (1995074 bp)
Overview 1 RT 1: 980384-985989 bp 2 RT 2: 1324802-1330730 bp Neighborhood of RT #1 [980384, 986015] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1324802, 1330732] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 980384-980947 bp Feature: domain Description: YbjK Location: 980390-980927 bp Feature: domain Description: YbjK Location: 9803 90-980927 bp Feature: gene Location: 981070-982122 bp Feature: domain Description: int Location: 981073-982072 bp Feature: domain Description: int Location: 981073 -982072 bp Feature: gene Location: 982538-984025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982943-983633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 982943 -983 63 3 bp Feature: gene Location: 984124-985068 bp Feature: gene Location: 985080-986015 bp Feature: domain Description: Phage_CI_repr Location: 985164-985347 bp Feature: domain Description: Phage_CI_repr Location: 985164-9853 47 bp Feature: domain Description: Phage_CI_repr Location: 985476-985668 bp Feature: domain Description: Phage_CI_repr Location: 985476-985668 bp Feature: domain Description: Phage_CI_C Location: 985695-985989 bp Feature: domain Description: Phage_CI_C Location: 985695-985989 bp Feature: gene Location: 1324802-1325941 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1324985-1325885 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 24985-13 25885 bp Feature: gene Location: 1326112-1326354 bp Feature: domain Description: DinI Location: 1326163-1326343 bp Feature: domain Description: DinI Location: 13 26163 -13 263 43 bp Feature: gene Location: 1327479-1328966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1327884-1328574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 27884-13 28574 bp Feature: gene Location: 1329045-1329464 bp Feature: domain Description: PRK10276 Location: 1329048-1329459 bp Feature: domain Description: PRK10276 Location: 13 29048-13 29459 bp Feature: gene Location: 1329467-1330732 bp Feature: domain Description: umuC Location: 1329470-1330730 bp Feature: domain Description: umuC Location: 13 29470-13 3 073 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)