myRT

myRT report for GCA_001031095.1_Kleb_pneu_CHS98_V1

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Seq: KQ088188.1 Klebsiella pneumoniae strain CHS98 genomic scaffold aetgH-supercont1.2, whole genome shotgun sequence (287048 bp)
Overview 1 RT 1: 151143-156137 bp Neighborhood of RT #1 [151143, 156139] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 151143-152414 bp Feature: domain Description: umuC Location: 151146-152409 bp Feature: domain Description: umuC Location: 1 51 1 46-1 52409 bp Feature: gene Location: 152414-152839 bp Feature: domain Description: PRK10276 Location: 152417-152825 bp Feature: domain Description: PRK1 0276 Location: 1 5241 7-1 52825 bp Feature: gene Location: 153242-154729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 153647-154337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 53647-1 54337 bp Feature: gene Location: 154963-155193 bp Feature: gene Location: 155714-156139 bp Feature: domain Description: Antirestrict Location: 155849-156137 bp Feature: domain Description: Antirestrict Location: 1 55849-1 561 37 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088187.1 Klebsiella pneumoniae strain CHS98 genomic scaffold aetgH-supercont1.1, whole genome shotgun sequence (5570815 bp)
Overview 1 RT 1: 1022894-1028499 bp 2 RT 2: 1368201-1372813 bp 3 RT 3: 1554134-1559433 bp 4 RT 4: 2923999-2930482 bp 5 RT 5: 3371925-3375406 bp Neighborhood of RT #1 [1022894, 1028525] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1368201, 1372815] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1554134, 1559435] PinE RVT-GII PRK10276 umuC Neighborhood of RT #4 [2923999, 2930484] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #5 [3371925, 3375406] Terminase_2 RVT-GII Feature: gene Location: 1022894-1023457 bp Feature: domain Description: YbjK Location: 1022900-1023437 bp Feature: domain Description: YbjK Location: 102 2 900-102 3437 bp Feature: gene Location: 1023580-1024632 bp Feature: domain Description: int Location: 1023583-1024582 bp Feature: domain Description: int Location: 102 3583-102 4582 bp Feature: gene Location: 1025048-1026535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1025453-1026143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 5453-102 6143 bp Feature: gene Location: 1026634-1027578 bp Feature: gene Location: 1027590-1028525 bp Feature: domain Description: Phage_CI_repr Location: 1027674-1027857 bp Feature: domain Description: Phage_CI_repr Location: 102 7674-102 7857 bp Feature: domain Description: Phage_CI_repr Location: 1027986-1028178 bp Feature: domain Description: Phage_CI_repr Location: 102 7986-102 8178 bp Feature: domain Description: Phage_CI_C Location: 1028205-1028499 bp Feature: domain Description: Phage_CI_C Location: 102 82 05-102 8499 bp Feature: gene Location: 1368201-1368443 bp Feature: domain Description: DinI Location: 1368252-1368432 bp Feature: domain Description: DinI Location: 13682 52 -1368432 bp Feature: gene Location: 1368938-1369112 bp Feature: gene Location: 1369562-1371049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1369967-1370657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1369967-1370657 bp Feature: gene Location: 1371128-1371547 bp Feature: domain Description: PRK10276 Location: 1371131-1371542 bp Feature: domain Description: PRK102 76 Location: 1371131-1371542 bp Feature: gene Location: 1371550-1372815 bp Feature: domain Description: umuC Location: 1371553-1372813 bp Feature: domain Description: umuC Location: 1371553-1372 813 bp Feature: gene Location: 1554134-1554272 bp Feature: gene Location: 1554338-1554787 bp Feature: domain Description: PinE Location: 1554347-1554779 bp Feature: domain Description: PinE Location: 1554347-1554779 bp Feature: gene Location: 1556182-1557669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556587-1557277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556587-15572 77 bp Feature: gene Location: 1557662-1558168 bp Feature: domain Description: PRK10276 Location: 1557752-1558163 bp Feature: domain Description: PRK102 76 Location: 1557752 -1558163 bp Feature: gene Location: 1558170-1559435 bp Feature: domain Description: umuC Location: 1558173-1559433 bp Feature: domain Description: umuC Location: 1558173-1559433 bp Feature: gene Location: 2923999-2925057 bp Feature: domain Description: YccC Location: 2924005-2925043 bp Feature: domain Description: YccC Location: 2 92 4005-2 92 5043 bp Feature: gene Location: 2925156-2925629 bp Feature: domain Description: PRK10016 Location: 2925159-2925618 bp Feature: domain Description: PRK10016 Location: 2 92 5159-2 92 5618 bp Feature: gene Location: 2925711-2927198 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2926116-2926806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 92 6116-2 92 6806 bp Feature: gene Location: 2927716-2928879 bp Feature: domain Description: dacD Location: 2927719-2928874 bp Feature: domain Description: dacD Location: 2 92 7719-2 92 8874 bp Feature: gene Location: 2929060-2930484 bp Feature: domain Description: SbcB Location: 2929066-2930482 bp Feature: domain Description: SbcB Location: 2 92 9066-2 930482 bp Feature: gene Location: 3371925-3372509 bp Feature: domain Description: Terminase_2 Location: 3371970-3372435 bp Feature: domain Description: Terminase_2 Location: 3371970-3372 435 bp Feature: gene Location: 3372587-3372844 bp Feature: gene Location: 3373245-3374732 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3373650-3374340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3373650-3374340 bp Feature: gene Location: 3374829-3375167 bp Feature: gene Location: 3375167-3375406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961), YccC (COG1289)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), Terminase_2 (pfam03592)