myRT

myRT report for GCA_001031105.1_Kleb_pneu_CHS99_V1

Download annotations/find similar RTs

Seq: KQ088181.1 Klebsiella pneumoniae strain CHS99 genomic scaffold aetgb-supercont1.4, whole genome shotgun sequence (143621 bp)
Overview 1 RT 1: 86037-91031 bp Neighborhood of RT #1 [86037, 91033] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 86037-87308 bp Feature: domain Description: umuC Location: 86040-87303 bp Feature: domain Description: umuC Location: 86040-87303 bp Feature: gene Location: 87308-87733 bp Feature: domain Description: PRK10276 Location: 87311-87719 bp Feature: domain Description: PRK1 0276 Location: 8731 1 -8771 9 bp Feature: gene Location: 88136-89623 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88541-89231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88541 -89231 bp Feature: gene Location: 89857-90087 bp Feature: gene Location: 90608-91033 bp Feature: domain Description: Antirestrict Location: 90743-91031 bp Feature: domain Description: Antirestrict Location: 90743-91 031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088179.1 Klebsiella pneumoniae strain CHS99 genomic scaffold aetgb-supercont1.2, whole genome shotgun sequence (2125097 bp)
Overview 1 RT 1: 777895-784378 bp Neighborhood of RT #1 [777895, 784380] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 777895-778953 bp Feature: domain Description: YccC Location: 777901-778939 bp Feature: domain Description: YccC Location: 777901-778939 bp Feature: gene Location: 779052-779525 bp Feature: domain Description: PRK10016 Location: 779055-779514 bp Feature: domain Description: PRK10016 Location: 779055-779514 bp Feature: gene Location: 779607-781094 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780012-780702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780012 -780702 bp Feature: gene Location: 781612-782775 bp Feature: domain Description: dacD Location: 781615-782770 bp Feature: domain Description: dacD Location: 781615-782 770 bp Feature: gene Location: 782956-784380 bp Feature: domain Description: SbcB Location: 782962-784378 bp Feature: domain Description: SbcB Location: 782 962 -784378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088178.1 Klebsiella pneumoniae strain CHS99 genomic scaffold aetgb-supercont1.1, whole genome shotgun sequence (2918083 bp)
Overview 1 RT 1: 482581-488404 bp 2 RT 2: 673295-677896 bp 3 RT 3: 1011003-1016438 bp 4 RT 4: 1019561-1025172 bp Neighborhood of RT #1 [482581, 488404] umuC PRK10276 RVT-GII PinE Neighborhood of RT #2 [673295, 677907] umuC PRK10276 RVT-GII DinI Neighborhood of RT #3 [1011003, 1016515] DinI RVT-GII Phage_GPA dam Neighborhood of RT #4 [1019561, 1025192] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int YbjK Feature: gene Location: 482581-483846 bp Feature: domain Description: umuC Location: 482584-483844 bp Feature: domain Description: umuC Location: 482584-483 844 bp Feature: gene Location: 483848-484354 bp Feature: domain Description: PRK10276 Location: 483938-484349 bp Feature: domain Description: PRK10276 Location: 483 93 8-4843 49 bp Feature: gene Location: 484347-485834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484752-485442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 484752-485442 bp Feature: gene Location: 487229-487678 bp Feature: domain Description: PinE Location: 487238-487670 bp Feature: domain Description: PinE Location: 48723 8-487670 bp Feature: gene Location: 487744-488404 bp Feature: gene Location: 673295-674560 bp Feature: domain Description: umuC Location: 673298-674558 bp Feature: domain Description: umuC Location: 673 298-674558 bp Feature: gene Location: 674563-674982 bp Feature: domain Description: PRK10276 Location: 674566-674977 bp Feature: domain Description: PRK10276 Location: 674566-674977 bp Feature: gene Location: 675061-676548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675466-676156 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 675466-676156 bp Feature: gene Location: 676998-677163 bp Feature: gene Location: 677665-677907 bp Feature: domain Description: DinI Location: 677716-677896 bp Feature: domain Description: DinI Location: 677716-677896 bp Feature: gene Location: 1011003-1011236 bp Feature: domain Description: DinI Location: 1011045-1011231 bp Feature: domain Description: DinI Location: 1011045-101123 1 bp Feature: gene Location: 1011247-1011435 bp Feature: gene Location: 1011536-1013023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1011941-1012631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1011941-101263 1 bp Feature: gene Location: 1013499-1015913 bp Feature: domain Description: Phage_GPA Location: 1014063-1015029 bp Feature: domain Description: Phage_GPA Location: 1014063 -1015029 bp Feature: gene Location: 1015910-1016515 bp Feature: domain Description: dam Location: 1015916-1016438 bp Feature: domain Description: dam Location: 1015916-101643 8 bp Feature: gene Location: 1019561-1020496 bp Feature: domain Description: Phage_CI_repr Location: 1019645-1019828 bp Feature: domain Description: Phage_CI_repr Location: 1019645-1019828 bp Feature: domain Description: Phage_CI_repr Location: 1019957-1020149 bp Feature: domain Description: Phage_CI_repr Location: 1019957-1020149 bp Feature: domain Description: Phage_CI_C Location: 1020176-1020470 bp Feature: domain Description: Phage_CI_C Location: 1020176-1020470 bp Feature: gene Location: 1020508-1021452 bp Feature: gene Location: 1021551-1023038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1021956-1022646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1021956-1022646 bp Feature: gene Location: 1023454-1024506 bp Feature: domain Description: int Location: 1023457-1024456 bp Feature: domain Description: int Location: 1023 457-1024456 bp Feature: gene Location: 1024629-1025192 bp Feature: domain Description: YbjK Location: 1024635-1025172 bp Feature: domain Description: YbjK Location: 102463 5-1025172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, PinE (COG1961), DinI (pfam06183), Phage_GPA (pfam05840), dam (TIGR00571), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)
YbjK (COG3226)