myRT

myRT report for GCA_001031145.1_Kleb_pneu_CHS100_V1

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Seq: KQ088194.1 Klebsiella pneumoniae strain CHS100 genomic scaffold aetyp-supercont1.3, whole genome shotgun sequence (1307113 bp)
Overview 1 RT 1: 752341-758824 bp Neighborhood of RT #1 [752341, 758826] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 752341-753399 bp Feature: domain Description: YccC Location: 752347-753385 bp Feature: domain Description: YccC Location: 752347-753385 bp Feature: gene Location: 753498-753971 bp Feature: domain Description: PRK10016 Location: 753501-753960 bp Feature: domain Description: PRK1 001 6 Location: 753501 -753960 bp Feature: gene Location: 754053-755540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 754458-755148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 754458-7551 48 bp Feature: gene Location: 756058-757221 bp Feature: domain Description: dacD Location: 756061-757216 bp Feature: domain Description: dacD Location: 756061 -75721 6 bp Feature: gene Location: 757402-758826 bp Feature: domain Description: SbcB Location: 757408-758824 bp Feature: domain Description: SbcB Location: 757408-758824 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088197.1 Klebsiella pneumoniae strain CHS100 genomic scaffold aetyp-supercont1.6, whole genome shotgun sequence (160972 bp)
Overview 1 RT 1: 103388-108382 bp Neighborhood of RT #1 [103388, 108384] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 103388-104659 bp Feature: domain Description: umuC Location: 103391-104654 bp Feature: domain Description: umuC Location: 103391-104654 bp Feature: gene Location: 104659-105084 bp Feature: domain Description: PRK10276 Location: 104662-105070 bp Feature: domain Description: PRK102 76 Location: 104662 -105070 bp Feature: gene Location: 105487-106974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105892-106582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105892 -106582 bp Feature: gene Location: 107208-107438 bp Feature: gene Location: 107959-108384 bp Feature: domain Description: Antirestrict Location: 108094-108382 bp Feature: domain Description: Antirestrict Location: 108094-108382 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088192.1 Klebsiella pneumoniae strain CHS100 genomic scaffold aetyp-supercont1.1, whole genome shotgun sequence (2045062 bp)
Overview 1 RT 1: 583732-587139 bp 2 RT 2: 1026499-1032104 bp 3 RT 3: 1035049-1040556 bp 4 RT 4: 1371943-1377361 bp 5 RT 5: 1556052-1561438 bp Neighborhood of RT #1 [583732, 587240] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026499, 1032130] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1035049, 1040561] dam Phage_GPA RVT-GII DinI Neighborhood of RT #4 [1371943, 1377363] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #5 [1556052, 1561440] PinE RVT-GII PRK10276 umuC Feature: gene Location: 583732-584463 bp Feature: domain Description: Laminin_G_3 Location: 584053-584407 bp Feature: domain Description: Laminin_G_3 Location: 584053 -584407 bp Feature: gene Location: 584460-584669 bp Feature: gene Location: 585119-586606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585524-586214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585524-586214 bp Feature: gene Location: 586684-586923 bp Feature: gene Location: 586923-587240 bp Feature: domain Description: PRK10276 Location: 586929-587043 bp Feature: domain Description: PRK10276 Location: 586929-587043 bp Feature: domain Description: PRK10276 Location: 587070-587139 bp Feature: domain Description: PRK10276 Location: 587070-58713 9 bp Feature: gene Location: 1026499-1027062 bp Feature: domain Description: YbjK Location: 1026505-1027042 bp Feature: domain Description: YbjK Location: 1026505-1027042 bp Feature: gene Location: 1027185-1028237 bp Feature: domain Description: int Location: 1027188-1028187 bp Feature: domain Description: int Location: 1027188-1028187 bp Feature: gene Location: 1028653-1030140 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029058-1029748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029058-1029748 bp Feature: gene Location: 1030239-1031183 bp Feature: gene Location: 1031195-1032130 bp Feature: domain Description: Phage_CI_repr Location: 1031279-1031462 bp Feature: domain Description: Phage_CI_repr Location: 103 1279-103 1462 bp Feature: domain Description: Phage_CI_repr Location: 1031591-1031783 bp Feature: domain Description: Phage_CI_repr Location: 103 1591-103 1783 bp Feature: domain Description: Phage_CI_C Location: 1031810-1032104 bp Feature: domain Description: Phage_CI_C Location: 103 1810-103 2104 bp Feature: gene Location: 1035049-1035654 bp Feature: domain Description: dam Location: 1035055-1035577 bp Feature: domain Description: dam Location: 103 5055-103 5577 bp Feature: gene Location: 1035651-1038065 bp Feature: domain Description: Phage_GPA Location: 1036215-1037181 bp Feature: domain Description: Phage_GPA Location: 103 6215-103 7181 bp Feature: gene Location: 1038541-1040028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038946-1039636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 8946-103 963 6 bp Feature: gene Location: 1040129-1040317 bp Feature: gene Location: 1040328-1040561 bp Feature: domain Description: DinI Location: 1040370-1040556 bp Feature: domain Description: DinI Location: 10403 70-1040556 bp Feature: gene Location: 1371943-1373082 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1372126-1373026 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 72126-13 73 026 bp Feature: gene Location: 1373253-1373495 bp Feature: domain Description: DinI Location: 1373304-1373484 bp Feature: domain Description: DinI Location: 13 73 3 04-13 73 484 bp Feature: gene Location: 1374110-1375597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374515-1375205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 74515-13 75205 bp Feature: gene Location: 1375676-1376095 bp Feature: domain Description: PRK10276 Location: 1375679-1376090 bp Feature: domain Description: PRK10276 Location: 13 75679-13 76090 bp Feature: gene Location: 1376098-1377363 bp Feature: domain Description: umuC Location: 1376101-1377361 bp Feature: domain Description: umuC Location: 13 76101-13 773 61 bp Feature: gene Location: 1556052-1556277 bp Feature: gene Location: 1556343-1556792 bp Feature: domain Description: PinE Location: 1556352-1556784 bp Feature: domain Description: PinE Location: 15563 52-1556784 bp Feature: gene Location: 1558187-1559674 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558592-1559282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558592-1559282 bp Feature: gene Location: 1559667-1560173 bp Feature: domain Description: PRK10276 Location: 1559757-1560168 bp Feature: domain Description: PRK10276 Location: 1559757-1560168 bp Feature: gene Location: 1560175-1561440 bp Feature: domain Description: umuC Location: 1560178-1561438 bp Feature: domain Description: umuC Location: 1560178-156143 8 bp Sorry, 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Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), PinE (COG1961)