myRT

myRT report for GCA_001031155.1_Kleb_pneu_CHS101_V1

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Seq: KQ088203.1 Klebsiella pneumoniae strain CHS101 genomic scaffold aetAf-supercont1.1, whole genome shotgun sequence (3427985 bp)
Overview 1 RT 1: 783109-789592 bp Neighborhood of RT #1 [783109, 789594] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 783109-784167 bp Feature: domain Description: YccC Location: 783115-784153 bp Feature: domain Description: YccC Location: 7831 1 5-7841 53 bp Feature: gene Location: 784266-784739 bp Feature: domain Description: PRK10016 Location: 784269-784728 bp Feature: domain Description: PRK1 001 6 Location: 784269-784728 bp Feature: gene Location: 784821-786308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 785226-785916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 785226-78591 6 bp Feature: gene Location: 786826-787989 bp Feature: domain Description: dacD Location: 786829-787984 bp Feature: domain Description: dacD Location: 786829-787984 bp Feature: gene Location: 788170-789594 bp Feature: domain Description: SbcB Location: 788176-789592 bp Feature: domain Description: SbcB Location: 7881 76-789592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088205.1 Klebsiella pneumoniae strain CHS101 genomic scaffold aetAf-supercont1.3, whole genome shotgun sequence (141847 bp)
Overview 1 RT 1: 84332-89326 bp Neighborhood of RT #1 [84332, 89328] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 84332-85603 bp Feature: domain Description: umuC Location: 84335-85598 bp Feature: domain Description: umuC Location: 84335-85598 bp Feature: gene Location: 85603-86028 bp Feature: domain Description: PRK10276 Location: 85606-86014 bp Feature: domain Description: PRK102 76 Location: 85606-86014 bp Feature: gene Location: 86431-87918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86836-87526 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 86836-8752 6 bp Feature: gene Location: 88152-88382 bp Feature: gene Location: 88903-89328 bp Feature: domain Description: Antirestrict Location: 89038-89326 bp Feature: domain Description: Antirestrict Location: 89038-8932 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088204.1 Klebsiella pneumoniae strain CHS101 genomic scaffold aetAf-supercont1.2, whole genome shotgun sequence (2040602 bp)
Overview 1 RT 1: 583552-586959 bp 2 RT 2: 1026310-1031915 bp 3 RT 3: 1034860-1040367 bp 4 RT 4: 1371552-1376970 bp 5 RT 5: 1555079-1560944 bp Neighborhood of RT #1 [583552, 587060] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026310, 1031941] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1034860, 1040372] dam Phage_GPA RVT-GII DinI Neighborhood of RT #4 [1371552, 1376972] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #5 [1555079, 1560946] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583552-584283 bp Feature: domain Description: Laminin_G_3 Location: 583873-584227 bp Feature: domain Description: Laminin_G_3 Location: 583 873 -584227 bp Feature: gene Location: 584280-584489 bp Feature: gene Location: 584939-586426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585344-586034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5853 44-58603 4 bp Feature: gene Location: 586504-586743 bp Feature: gene Location: 586743-587060 bp Feature: domain Description: PRK10276 Location: 586749-586863 bp Feature: domain Description: PRK10276 Location: 586749-586863 bp Feature: domain Description: PRK10276 Location: 586890-586959 bp Feature: domain Description: PRK10276 Location: 586890-586959 bp Feature: gene Location: 1026310-1026873 bp Feature: domain Description: YbjK Location: 1026316-1026853 bp Feature: domain Description: YbjK Location: 10263 16-1026853 bp Feature: gene Location: 1026996-1028048 bp Feature: domain Description: int Location: 1026999-1027998 bp Feature: domain Description: int Location: 1026999-1027998 bp Feature: gene Location: 1028464-1029951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028869-1029559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028869-1029559 bp Feature: gene Location: 1030050-1030994 bp Feature: gene Location: 1031006-1031941 bp Feature: domain Description: Phage_CI_repr Location: 1031090-1031273 bp Feature: domain Description: Phage_CI_repr Location: 103 1090-103 1273 bp Feature: domain Description: Phage_CI_repr Location: 1031402-1031594 bp Feature: domain Description: Phage_CI_repr Location: 103 1402-103 1594 bp Feature: domain Description: Phage_CI_C Location: 1031621-1031915 bp Feature: domain Description: Phage_CI_C Location: 103 1621-103 1915 bp Feature: gene Location: 1034860-1035465 bp Feature: domain Description: dam Location: 1034866-1035388 bp Feature: domain Description: dam Location: 103 4866-103 53 88 bp Feature: gene Location: 1035462-1037876 bp Feature: domain Description: Phage_GPA Location: 1036026-1036992 bp Feature: domain Description: Phage_GPA Location: 103 6026-103 6992 bp Feature: gene Location: 1038352-1039839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038757-1039447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103 8757-103 9447 bp Feature: gene Location: 1039940-1040128 bp Feature: gene Location: 1040139-1040372 bp Feature: domain Description: DinI Location: 1040181-1040367 bp Feature: domain Description: DinI Location: 1040181-10403 67 bp Feature: gene Location: 1371552-1372691 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371735-1372635 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 7173 5-13 7263 5 bp Feature: gene Location: 1372862-1373104 bp Feature: domain Description: DinI Location: 1372913-1373093 bp Feature: domain Description: DinI Location: 13 72913 -13 73 093 bp Feature: gene Location: 1373719-1375206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1374124-1374814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 74124-13 74814 bp Feature: gene Location: 1375285-1375704 bp Feature: domain Description: PRK10276 Location: 1375288-1375699 bp Feature: domain Description: PRK10276 Location: 13 75288-13 75699 bp Feature: gene Location: 1375707-1376972 bp Feature: domain Description: umuC Location: 1375710-1376970 bp Feature: domain Description: umuC Location: 13 75710-13 76970 bp Feature: gene Location: 1555079-1555783 bp Feature: domain Description: Rve Location: 1555082-1555727 bp Feature: domain Description: Rve Location: 1555082-1555727 bp Feature: gene Location: 1555849-1556298 bp Feature: domain Description: PinE Location: 1555858-1556290 bp Feature: domain Description: PinE Location: 1555858-1556290 bp Feature: gene Location: 1557693-1559180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558098-1558788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1558098-1558788 bp Feature: gene Location: 1559173-1559679 bp Feature: domain Description: PRK10276 Location: 1559263-1559674 bp Feature: domain Description: PRK10276 Location: 1559263 -1559674 bp Feature: gene Location: 1559681-1560946 bp Feature: domain Description: umuC Location: 1559684-1560944 bp Feature: domain Description: umuC Location: 1559684-1560944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), Rve (COG3316), PinE (COG1961)