myRT

myRT report for GCA_001031175.1_Kleb_pneu_CHS102_V1

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Seq: KQ088210.1 Klebsiella pneumoniae strain CHS102 genomic scaffold aetyU-supercont1.1, whole genome shotgun sequence (4703453 bp)
Overview 1 RT 1: 583207-586614 bp 2 RT 2: 1025849-1031454 bp 3 RT 3: 1034399-1039906 bp 4 RT 4: 1371389-1376807 bp 5 RT 5: 1555316-1560708 bp 6 RT 6: 2691325-2697808 bp Neighborhood of RT #1 [583207, 586715] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025849, 1031480] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1034399, 1039911] dam Phage_GPA RVT-GII DinI Neighborhood of RT #4 [1371389, 1376809] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #5 [1555316, 1560710] PinE RVT-GII PRK10276 umuC Neighborhood of RT #6 [2691325, 2697810] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583207-583938 bp Feature: domain Description: Laminin_G_3 Location: 583528-583882 bp Feature: domain Description: Laminin_G_3 Location: 583528-583882 bp Feature: gene Location: 583935-584144 bp Feature: gene Location: 584594-586081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584999-585689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584999-585689 bp Feature: gene Location: 586159-586398 bp Feature: gene Location: 586398-586715 bp Feature: domain Description: PRK10276 Location: 586404-586518 bp Feature: domain Description: PRK1 0276 Location: 586404-58651 8 bp Feature: domain Description: PRK10276 Location: 586545-586614 bp Feature: domain Description: PRK1 0276 Location: 586545-58661 4 bp Feature: gene Location: 1025849-1026412 bp Feature: domain Description: YbjK Location: 1025855-1026392 bp Feature: domain Description: YbjK Location: 1 025855-1 026392 bp Feature: gene Location: 1026535-1027587 bp Feature: domain Description: int Location: 1026538-1027537 bp Feature: domain Description: int Location: 1 026538-1 027537 bp Feature: gene Location: 1028003-1029490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028408-1029098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028408-1 029098 bp Feature: gene Location: 1029589-1030533 bp Feature: gene Location: 1030545-1031480 bp Feature: domain Description: Phage_CI_repr Location: 1030629-1030812 bp Feature: domain Description: Phage_CI_repr Location: 1 030629-1 03081 2 bp Feature: domain Description: Phage_CI_repr Location: 1030941-1031133 bp Feature: domain Description: Phage_CI_repr Location: 1 030941 -1 031 1 33 bp Feature: domain Description: Phage_CI_C Location: 1031160-1031454 bp Feature: domain Description: Phage_CI_C Location: 1 031 1 60-1 031 454 bp Feature: gene Location: 1034399-1035004 bp Feature: domain Description: dam Location: 1034405-1034927 bp Feature: domain Description: dam Location: 1 034405-1 034927 bp Feature: gene Location: 1035001-1037415 bp Feature: domain Description: Phage_GPA Location: 1035565-1036531 bp Feature: domain Description: Phage_GPA Location: 1 035565-1 036531 bp Feature: gene Location: 1037891-1039378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1038296-1038986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 038296-1 038986 bp Feature: gene Location: 1039479-1039667 bp Feature: gene Location: 1039678-1039911 bp Feature: domain Description: DinI Location: 1039720-1039906 bp Feature: domain Description: DinI Location: 1 039720-1 039906 bp Feature: gene Location: 1371389-1372528 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371572-1372472 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 371 572-1 372472 bp Feature: gene Location: 1372699-1372941 bp Feature: domain Description: DinI Location: 1372750-1372930 bp Feature: domain Description: DinI Location: 1 372750-1 372930 bp Feature: gene Location: 1373556-1375043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373961-1374651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 373961 -1 374651 bp Feature: gene Location: 1375122-1375541 bp Feature: domain Description: PRK10276 Location: 1375125-1375536 bp Feature: domain Description: PRK1 0276 Location: 1 3751 25-1 375536 bp Feature: gene Location: 1375544-1376809 bp Feature: domain Description: umuC Location: 1375547-1376807 bp Feature: domain Description: umuC Location: 1 375547-1 376807 bp Feature: gene Location: 1555316-1555547 bp Feature: gene Location: 1555613-1556062 bp Feature: domain Description: PinE Location: 1555622-1556054 bp Feature: domain Description: PinE Location: 1 555622-1 556054 bp Feature: gene Location: 1557457-1558944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557862-1558552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 557862-1 558552 bp Feature: gene Location: 1558937-1559443 bp Feature: domain Description: PRK10276 Location: 1559027-1559438 bp Feature: domain Description: PRK1 0276 Location: 1 559027-1 559438 bp Feature: gene Location: 1559445-1560710 bp Feature: domain Description: umuC Location: 1559448-1560708 bp Feature: domain Description: umuC Location: 1 559448-1 560708 bp Feature: gene Location: 2691325-2692383 bp Feature: domain Description: YccC Location: 2691331-2692369 bp Feature: domain Description: YccC Location: 2691 331 -2692369 bp Feature: gene Location: 2692482-2692955 bp Feature: domain Description: PRK10016 Location: 2692485-2692944 bp Feature: domain Description: PRK1 001 6 Location: 2692485-2692944 bp Feature: gene Location: 2693037-2694524 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2693442-2694132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2693442-26941 32 bp Feature: gene Location: 2695042-2696205 bp Feature: domain Description: dacD Location: 2695045-2696200 bp Feature: domain Description: dacD Location: 2695045-2696200 bp Feature: gene Location: 2696386-2697810 bp Feature: domain Description: SbcB Location: 2696392-2697808 bp Feature: domain Description: SbcB Location: 2696392-2697808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088212.1 Klebsiella pneumoniae strain CHS102 genomic scaffold aetyU-supercont1.3, whole genome shotgun sequence (207062 bp)
Overview 1 RT 1: 149479-154473 bp Neighborhood of RT #1 [149479, 154475] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 149479-150750 bp Feature: domain Description: umuC Location: 149482-150745 bp Feature: domain Description: umuC Location: 149482 -150745 bp Feature: gene Location: 150750-151175 bp Feature: domain Description: PRK10276 Location: 150753-151161 bp Feature: domain Description: PRK102 76 Location: 150753-151161 bp Feature: gene Location: 151578-153065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151983-152673 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151983-152 673 bp Feature: gene Location: 153299-153529 bp Feature: gene Location: 154050-154475 bp Feature: domain Description: Antirestrict Location: 154185-154473 bp Feature: domain Description: Antirestrict Location: 154185-154473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)