myRT

myRT report for GCA_001031185.1_Kleb_pneu_CHS104_V1

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Seq: KQ088218.1 Klebsiella pneumoniae strain CHS104 genomic scaffold aetAk-supercont1.4, whole genome shotgun sequence (100749 bp)
Overview 1 RT 1: 43165-48159 bp Neighborhood of RT #1 [43165, 48161] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 43165-44436 bp Feature: domain Description: umuC Location: 43168-44431 bp Feature: domain Description: umuC Location: 431 68-44431 bp Feature: gene Location: 44436-44861 bp Feature: domain Description: PRK10276 Location: 44439-44847 bp Feature: domain Description: PRK1 0276 Location: 44439-44847 bp Feature: gene Location: 45264-46751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45669-46359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 45669-46359 bp Feature: gene Location: 46985-47215 bp Feature: gene Location: 47736-48161 bp Feature: domain Description: Antirestrict Location: 47871-48159 bp Feature: domain Description: Antirestrict Location: 47871 -481 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088215.1 Klebsiella pneumoniae strain CHS104 genomic scaffold aetAk-supercont1.1, whole genome shotgun sequence (5283954 bp)
Overview 1 RT 1: 332790-336197 bp 2 RT 2: 776321-781926 bp 3 RT 3: 1086911-1092329 bp 4 RT 4: 1264527-1270392 bp 5 RT 5: 2637518-2644001 bp Neighborhood of RT #1 [332790, 336298] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [776321, 781952] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1086911, 1092331] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1264527, 1270394] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2637518, 2644003] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 332790-333521 bp Feature: domain Description: Laminin_G_3 Location: 333111-333465 bp Feature: domain Description: Laminin_G_3 Location: 333111-333465 bp Feature: gene Location: 333518-333727 bp Feature: gene Location: 334177-335664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334582-335272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334582 -3352 72 bp Feature: gene Location: 335742-335981 bp Feature: gene Location: 335981-336298 bp Feature: domain Description: PRK10276 Location: 335987-336101 bp Feature: domain Description: PRK102 76 Location: 335987-336101 bp Feature: domain Description: PRK10276 Location: 336128-336197 bp Feature: domain Description: PRK102 76 Location: 33612 8-336197 bp Feature: gene Location: 776321-776884 bp Feature: domain Description: YbjK Location: 776327-776864 bp Feature: domain Description: YbjK Location: 77632 7-776864 bp Feature: gene Location: 777007-778059 bp Feature: domain Description: int Location: 777010-778009 bp Feature: domain Description: int Location: 777010-778009 bp Feature: gene Location: 778475-779962 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778880-779570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778880-779570 bp Feature: gene Location: 780061-781005 bp Feature: gene Location: 781017-781952 bp Feature: domain Description: Phage_CI_repr Location: 781101-781284 bp Feature: domain Description: Phage_CI_repr Location: 781101-7812 84 bp Feature: domain Description: Phage_CI_repr Location: 781413-781605 bp Feature: domain Description: Phage_CI_repr Location: 781413-781605 bp Feature: domain Description: Phage_CI_C Location: 781632-781926 bp Feature: domain Description: Phage_CI_C Location: 781632 -78192 6 bp Feature: gene Location: 1086911-1088050 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1087094-1087994 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1087094-1087994 bp Feature: gene Location: 1088221-1088463 bp Feature: domain Description: DinI Location: 1088272-1088452 bp Feature: domain Description: DinI Location: 10882 72 -1088452 bp Feature: gene Location: 1089078-1090565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1089483-1090173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1089483-1090173 bp Feature: gene Location: 1090644-1091063 bp Feature: domain Description: PRK10276 Location: 1090647-1091058 bp Feature: domain Description: PRK102 76 Location: 1090647-1091058 bp Feature: gene Location: 1091066-1092331 bp Feature: domain Description: umuC Location: 1091069-1092329 bp Feature: domain Description: umuC Location: 1091069-1092 32 9 bp Feature: gene Location: 1264527-1265231 bp Feature: domain Description: Rve Location: 1264530-1265175 bp Feature: domain Description: Rve Location: 12 64530-12 65175 bp Feature: gene Location: 1265297-1265746 bp Feature: domain Description: PinE Location: 1265306-1265738 bp Feature: domain Description: PinE Location: 12 65306-12 65738 bp Feature: gene Location: 1267141-1268628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1267546-1268236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 67546-12 682 36 bp Feature: gene Location: 1268621-1269127 bp Feature: domain Description: PRK10276 Location: 1268711-1269122 bp Feature: domain Description: PRK102 76 Location: 12 68711-12 6912 2 bp Feature: gene Location: 1269129-1270394 bp Feature: domain Description: umuC Location: 1269132-1270392 bp Feature: domain Description: umuC Location: 12 69132 -12 70392 bp Feature: gene Location: 2637518-2638576 bp Feature: domain Description: YccC Location: 2637524-2638562 bp Feature: domain Description: YccC Location: 2 63752 4-2 638562 bp Feature: gene Location: 2638675-2639148 bp Feature: domain Description: PRK10016 Location: 2638678-2639137 bp Feature: domain Description: PRK10016 Location: 2 638678-2 639137 bp Feature: gene Location: 2639230-2640717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2639635-2640325 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 639635-2 64032 5 bp Feature: gene Location: 2641235-2642398 bp Feature: domain Description: dacD Location: 2641238-2642393 bp Feature: domain Description: dacD Location: 2 6412 38-2 642 393 bp Feature: gene Location: 2642579-2644003 bp Feature: domain Description: SbcB Location: 2642585-2644001 bp Feature: domain Description: SbcB Location: 2 642 585-2 644001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)