myRT

myRT report for GCA_001031225.1_Kleb_pneu_CHS105_V1

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Seq: KQ088220.1 Klebsiella pneumoniae strain CHS105 genomic scaffold aetxd-supercont1.1, whole genome shotgun sequence (5568344 bp)
Overview 1 RT 1: 1023643-1029248 bp 2 RT 2: 1368303-1372907 bp 3 RT 3: 1550749-1556228 bp 4 RT 4: 2923361-2929844 bp Neighborhood of RT #1 [1023643, 1029274] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1368303, 1372909] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1550749, 1556230] PinE RVT-GII PRK10276 umuC Neighborhood of RT #4 [2923361, 2929846] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1023643-1024206 bp Feature: domain Description: YbjK Location: 1023649-1024186 bp Feature: domain Description: YbjK Location: 1 023649-1 0241 86 bp Feature: gene Location: 1024329-1025381 bp Feature: domain Description: int Location: 1024332-1025331 bp Feature: domain Description: int Location: 1 024332-1 025331 bp Feature: gene Location: 1025797-1027284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026202-1026892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 026202-1 026892 bp Feature: gene Location: 1027383-1028327 bp Feature: gene Location: 1028339-1029274 bp Feature: domain Description: Phage_CI_repr Location: 1028423-1028606 bp Feature: domain Description: Phage_CI_repr Location: 1 028423-1 028606 bp Feature: domain Description: Phage_CI_repr Location: 1028735-1028927 bp Feature: domain Description: Phage_CI_repr Location: 1 028735-1 028927 bp Feature: domain Description: Phage_CI_C Location: 1028954-1029248 bp Feature: domain Description: Phage_CI_C Location: 1 028954-1 029248 bp Feature: gene Location: 1368303-1368545 bp Feature: domain Description: DinI Location: 1368354-1368534 bp Feature: domain Description: DinI Location: 1 368354-1 368534 bp Feature: gene Location: 1369028-1369206 bp Feature: gene Location: 1369656-1371143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370061-1370751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 370061 -1 370751 bp Feature: gene Location: 1371222-1371641 bp Feature: domain Description: PRK10276 Location: 1371225-1371636 bp Feature: domain Description: PRK1 0276 Location: 1 371 225-1 371 636 bp Feature: gene Location: 1371644-1372909 bp Feature: domain Description: umuC Location: 1371647-1372907 bp Feature: domain Description: umuC Location: 1 371 647-1 372907 bp Feature: gene Location: 1550749-1551067 bp Feature: gene Location: 1551133-1551582 bp Feature: domain Description: PinE Location: 1551142-1551574 bp Feature: domain Description: PinE Location: 1 551 1 42-1 551 574 bp Feature: gene Location: 1552977-1554464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1553382-1554072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 553382-1 554072 bp Feature: gene Location: 1554457-1554963 bp Feature: domain Description: PRK10276 Location: 1554547-1554958 bp Feature: domain Description: PRK1 0276 Location: 1 554547-1 554958 bp Feature: gene Location: 1554965-1556230 bp Feature: domain Description: umuC Location: 1554968-1556228 bp Feature: domain Description: umuC Location: 1 554968-1 556228 bp Feature: gene Location: 2923361-2924419 bp Feature: domain Description: YccC Location: 2923367-2924405 bp Feature: domain Description: YccC Location: 2923367-2924405 bp Feature: gene Location: 2924518-2924991 bp Feature: domain Description: PRK10016 Location: 2924521-2924980 bp Feature: domain Description: PRK1 001 6 Location: 2924521 -2924980 bp Feature: gene Location: 2925073-2926560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2925478-2926168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2925478-29261 68 bp Feature: gene Location: 2927078-2928241 bp Feature: domain Description: dacD Location: 2927081-2928236 bp Feature: domain Description: dacD Location: 2927081 -2928236 bp Feature: gene Location: 2928422-2929846 bp Feature: domain Description: SbcB Location: 2928428-2929844 bp Feature: domain Description: SbcB Location: 2928428-2929844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961), YccC (COG1289)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088221.1 Klebsiella pneumoniae strain CHS105 genomic scaffold aetxd-supercont1.2, whole genome shotgun sequence (170005 bp)
Overview 1 RT 1: 111918-116912 bp Neighborhood of RT #1 [111918, 116914] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 111918-113189 bp Feature: domain Description: umuC Location: 111921-113184 bp Feature: domain Description: umuC Location: 11192 1-113184 bp Feature: gene Location: 113189-113614 bp Feature: domain Description: PRK10276 Location: 113192-113600 bp Feature: domain Description: PRK102 76 Location: 113192 -113600 bp Feature: gene Location: 114017-115504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114422-115112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11442 2 -115112 bp Feature: gene Location: 115738-115968 bp Feature: gene Location: 116489-116914 bp Feature: domain Description: Antirestrict Location: 116624-116912 bp Feature: domain Description: Antirestrict Location: 11662 4-116912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)