myRT

myRT report for GCA_001031235.1_Kleb_pneu_CHS106_V1

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Seq: KQ088228.1 Klebsiella pneumoniae strain CHS106 genomic scaffold aetyX-supercont1.3, whole genome shotgun sequence (966528 bp)
Overview 1 RT 1: 569-3976 bp 2 RT 2: 443337-448942 bp 3 RT 3: 786803-792221 bp Neighborhood of RT #1 [569, 4077] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [443337, 448968] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [786803, 792223] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 569-1300 bp Feature: domain Description: Laminin_G_3 Location: 890-1244 bp Feature: domain Description: Laminin_G_3 Location: 890-1 244 bp Feature: gene Location: 1297-1506 bp Feature: gene Location: 1956-3443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2361-3051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2361 -3051 bp Feature: gene Location: 3521-3760 bp Feature: gene Location: 3760-4077 bp Feature: domain Description: PRK10276 Location: 3766-3880 bp Feature: domain Description: PRK1 0276 Location: 3766-3880 bp Feature: domain Description: PRK10276 Location: 3907-3976 bp Feature: domain Description: PRK1 0276 Location: 3907-3976 bp Feature: gene Location: 443337-443900 bp Feature: domain Description: YbjK Location: 443343-443880 bp Feature: domain Description: YbjK Location: 443343-443880 bp Feature: gene Location: 444023-445075 bp Feature: domain Description: int Location: 444026-445025 bp Feature: domain Description: int Location: 444026-445025 bp Feature: gene Location: 445491-446978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445896-446586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 445896-446586 bp Feature: gene Location: 447077-448021 bp Feature: gene Location: 448033-448968 bp Feature: domain Description: Phage_CI_repr Location: 448117-448300 bp Feature: domain Description: Phage_CI_repr Location: 4481 1 7-448300 bp Feature: domain Description: Phage_CI_repr Location: 448429-448621 bp Feature: domain Description: Phage_CI_repr Location: 448429-448621 bp Feature: domain Description: Phage_CI_C Location: 448648-448942 bp Feature: domain Description: Phage_CI_C Location: 448648-448942 bp Feature: gene Location: 786803-787942 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 786986-787886 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 786986-787886 bp Feature: gene Location: 788113-788355 bp Feature: domain Description: DinI Location: 788164-788344 bp Feature: domain Description: DinI Location: 7881 64-788344 bp Feature: gene Location: 788970-790457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 789375-790065 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 789375-790065 bp Feature: gene Location: 790536-790955 bp Feature: domain Description: PRK10276 Location: 790539-790950 bp Feature: domain Description: PRK1 0276 Location: 790539-790950 bp Feature: gene Location: 790958-792223 bp Feature: domain Description: umuC Location: 790961-792221 bp Feature: domain Description: umuC Location: 790961 -792221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Laminin_G_3 (pfam13385), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)

Seq: KQ088229.1 Klebsiella pneumoniae strain CHS106 genomic scaffold aetyX-supercont1.4, whole genome shotgun sequence (120030 bp)
Overview 1 RT 1: 62462-67456 bp Neighborhood of RT #1 [62462, 67458] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 62462-63733 bp Feature: domain Description: umuC Location: 62465-63728 bp Feature: domain Description: umuC Location: 62 465-6372 8 bp Feature: gene Location: 63733-64158 bp Feature: domain Description: PRK10276 Location: 63736-64144 bp Feature: domain Description: PRK102 76 Location: 63736-64144 bp Feature: gene Location: 64561-66048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64966-65656 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64966-65656 bp Feature: gene Location: 66282-66512 bp Feature: gene Location: 67033-67458 bp Feature: domain Description: Antirestrict Location: 67168-67456 bp Feature: domain Description: Antirestrict Location: 67168-67456 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088226.1 Klebsiella pneumoniae strain CHS106 genomic scaffold aetyX-supercont1.1, whole genome shotgun sequence (2551285 bp)
Overview 1 RT 1: 1996848-2003331 bp Neighborhood of RT #1 [1996848, 2003333] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1996848-1997906 bp Feature: domain Description: YccC Location: 1996854-1997892 bp Feature: domain Description: YccC Location: 1996854-1997892 bp Feature: gene Location: 1998005-1998478 bp Feature: domain Description: PRK10016 Location: 1998008-1998467 bp Feature: domain Description: PRK10016 Location: 1998008-1998467 bp Feature: gene Location: 1998560-2000047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1998965-1999655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1998965-1999655 bp Feature: gene Location: 2000565-2001728 bp Feature: domain Description: dacD Location: 2000568-2001723 bp Feature: domain Description: dacD Location: 2000568-2001723 bp Feature: gene Location: 2001909-2003333 bp Feature: domain Description: SbcB Location: 2001915-2003331 bp Feature: domain Description: SbcB Location: 2001915-2003 3 3 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)