myRT

myRT report for GCA_001031245.1_Kleb_pneu_CHS107_V1

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Seq: KQ088239.1 Klebsiella pneumoniae strain CHS107 genomic scaffold aetAF-supercont1.4, whole genome shotgun sequence (382580 bp)
Overview 1 RT 1: 322184-331796 bp Neighborhood of RT #1 [322184, 331912] COG2958 AAA_15 AAA_15 RVT-Retrons COG0610 AAA_13 AAA_13 Feature: gene Location: 322184-323116 bp Ori: KLZ63765.1 Feature: domain Description: COG2958 Location: 322202-323096 bp Feature: domain Description: COG2958 Location: 322202-323096 bp Feature: gene Location: 323690-325807 bp Ori: KLZ63766.1 Feature: domain Description: AAA_15 Location: 323693-324110 bp Feature: domain Description: AAA_1 5 Location: 323693-3241 1 0 bp Feature: domain Description: AAA_15 Location: 324248-324674 bp Feature: domain Description: AAA_1 5 Location: 324248-324674 bp Feature: gene Location: 325980-327080 bp Ori: KLZ63767.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 326121-326682 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3261 21 -326682 bp Feature: gene Location: 327622-330741 bp Ori: KLZ63768.1 Feature: domain Description: COG0610 Location: 327706-330718 bp Feature: domain Description: COG061 0 Location: 327706-33071 8 bp Feature: gene Location: 330734-331912 bp Ori: KLZ63769.1 Feature: domain Description: AAA_13 Location: 330827-331001 bp Feature: domain Description: AAA_1 3 Location: 330827-331 001 bp Feature: domain Description: AAA_13 Location: 331223-331796 bp Feature: domain Description: AAA_1 3 Location: 331 223-331 796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2958 (Uncharacterized protein ), AAA_15 (pfam13175), RVT-Retrons, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), AAA_13 (pfam13166)

Seq: KQ088241.1 Klebsiella pneumoniae strain CHS107 genomic scaffold aetAF-supercont1.6, whole genome shotgun sequence (223834 bp)
Overview 1 RT 1: 79063-84103 bp Neighborhood of RT #1 [79063, 84105] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 79063-80334 bp Ori: KLZ62030.1 Feature: domain Description: umuC Location: 79066-80329 bp Feature: domain Description: umuC Location: 79066-8032 9 bp Feature: gene Location: 80334-80759 bp Ori: KLZ62031.1 Feature: domain Description: PRK10276 Location: 80337-80745 bp Feature: domain Description: PRK102 76 Location: 80337-80745 bp Feature: gene Location: 81239-82696 bp Ori: KLZ62032.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81566-82304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81566-82 304 bp Feature: gene Location: 82930-83160 bp Feature: gene Location: 83680-84105 bp Ori: KLZ62034.1 Feature: domain Description: Antirestrict Location: 83815-84103 bp Feature: domain Description: Antirestrict Location: 83815-84103 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088237.1 Klebsiella pneumoniae strain CHS107 genomic scaffold aetAF-supercont1.2, whole genome shotgun sequence (797263 bp)
Overview 1 RT 1: 37801-44483 bp Neighborhood of RT #1 [37801, 44483] COG3440 RVT-Retrons HTH_XRE Feature: gene Location: 37801-38859 bp Ori: KLZ65373.1 Feature: domain Description: COG3440 Location: 38431-38818 bp Feature: domain Description: COG3 440 Location: 3 843 1-3 8818 bp Feature: gene Location: 39058-42909 bp Feature: gene Location: 42950-43921 bp Ori: KLZ65375.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43100-43667 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 43 100-43 667 bp Feature: gene Location: 43902-44192 bp Ori: KLZ65376.1 Feature: domain Description: HTH_XRE Location: 43914-44079 bp Feature: domain Description: HTH_XRE Location: 43 914-44079 bp Feature: gene Location: 44244-44483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3440 (Predicted restriction endonuclease ), RVT-Retrons, HTH_XRE (smart00530)