myRT

myRT report for GCA_001031265.1_Kleb_pneu_CHS109_V1

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Seq: KQ088248.1 Klebsiella pneumoniae strain CHS109 genomic scaffold aetyM-supercont1.1, whole genome shotgun sequence (4830577 bp)
Overview 1 RT 1: 583787-587194 bp 2 RT 2: 1026429-1032034 bp 3 RT 3: 1369531-1374949 bp 4 RT 4: 1554313-1559657 bp 5 RT 5: 2925959-2932442 bp Neighborhood of RT #1 [583787, 587295] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026429, 1032060] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369531, 1374951] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554313, 1559659] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2925959, 2932444] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583787-584518 bp Feature: domain Description: Laminin_G_3 Location: 584108-584462 bp Feature: domain Description: Laminin_G_3 Location: 5841 08-584462 bp Feature: gene Location: 584515-584724 bp Feature: gene Location: 585174-586661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585579-586269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585579-586269 bp Feature: gene Location: 586739-586978 bp Feature: gene Location: 586978-587295 bp Feature: domain Description: PRK10276 Location: 586984-587098 bp Feature: domain Description: PRK1 0276 Location: 586984-587098 bp Feature: domain Description: PRK10276 Location: 587125-587194 bp Feature: domain Description: PRK1 0276 Location: 5871 25-5871 94 bp Feature: gene Location: 1026429-1026992 bp Feature: domain Description: YbjK Location: 1026435-1026972 bp Feature: domain Description: YbjK Location: 1 026435-1 026972 bp Feature: gene Location: 1027115-1028167 bp Feature: domain Description: int Location: 1027118-1028117 bp Feature: domain Description: int Location: 1 0271 1 8-1 0281 1 7 bp Feature: gene Location: 1028583-1030070 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028988-1029678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028988-1 029678 bp Feature: gene Location: 1030169-1031113 bp Feature: gene Location: 1031125-1032060 bp Feature: domain Description: Phage_CI_repr Location: 1031209-1031392 bp Feature: domain Description: Phage_CI_repr Location: 1 031 209-1 031 392 bp Feature: domain Description: Phage_CI_repr Location: 1031521-1031713 bp Feature: domain Description: Phage_CI_repr Location: 1 031 521 -1 031 71 3 bp Feature: domain Description: Phage_CI_C Location: 1031740-1032034 bp Feature: domain Description: Phage_CI_C Location: 1 031 740-1 032034 bp Feature: gene Location: 1369531-1370670 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369714-1370614 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 36971 4-1 37061 4 bp Feature: gene Location: 1370841-1371083 bp Feature: domain Description: DinI Location: 1370892-1371072 bp Feature: domain Description: DinI Location: 1 370892-1 371 072 bp Feature: gene Location: 1371698-1373185 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372103-1372793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3721 03-1 372793 bp Feature: gene Location: 1373264-1373683 bp Feature: domain Description: PRK10276 Location: 1373267-1373678 bp Feature: domain Description: PRK1 0276 Location: 1 373267-1 373678 bp Feature: gene Location: 1373686-1374951 bp Feature: domain Description: umuC Location: 1373689-1374949 bp Feature: domain Description: umuC Location: 1 373689-1 374949 bp Feature: gene Location: 1554313-1554496 bp Feature: gene Location: 1554562-1555011 bp Feature: domain Description: PinE Location: 1554571-1555003 bp Feature: domain Description: PinE Location: 1 554571 -1 555003 bp Feature: gene Location: 1556406-1557893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556811-1557501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 55681 1 -1 557501 bp Feature: gene Location: 1557886-1558392 bp Feature: domain Description: PRK10276 Location: 1557976-1558387 bp Feature: domain Description: PRK1 0276 Location: 1 557976-1 558387 bp Feature: gene Location: 1558394-1559659 bp Feature: domain Description: umuC Location: 1558397-1559657 bp Feature: domain Description: umuC Location: 1 558397-1 559657 bp Feature: gene Location: 2925959-2927017 bp Feature: domain Description: YccC Location: 2925965-2927003 bp Feature: domain Description: YccC Location: 2925965-2927003 bp Feature: gene Location: 2927116-2927589 bp Feature: domain Description: PRK10016 Location: 2927119-2927578 bp Feature: domain Description: PRK1 001 6 Location: 29271 1 9-2927578 bp Feature: gene Location: 2927671-2929158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2928076-2928766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2928076-2928766 bp Feature: gene Location: 2929676-2930839 bp Feature: domain Description: dacD Location: 2929679-2930834 bp Feature: domain Description: dacD Location: 2929679-2930834 bp Feature: gene Location: 2931020-2932444 bp Feature: domain Description: SbcB Location: 2931026-2932442 bp Feature: domain Description: SbcB Location: 2931 026-2932442 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088250.1 Klebsiella pneumoniae strain CHS109 genomic scaffold aetyM-supercont1.3, whole genome shotgun sequence (178793 bp)
Overview 1 RT 1: 121209-126203 bp Neighborhood of RT #1 [121209, 126205] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 121209-122480 bp Feature: domain Description: umuC Location: 121212-122475 bp Feature: domain Description: umuC Location: 12 12 12 -12 2 475 bp Feature: gene Location: 122480-122905 bp Feature: domain Description: PRK10276 Location: 122483-122891 bp Feature: domain Description: PRK102 76 Location: 12 2 483-12 2 891 bp Feature: gene Location: 123308-124795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 123713-124403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 3713-12 4403 bp Feature: gene Location: 125029-125259 bp Feature: gene Location: 125780-126205 bp Feature: domain Description: Antirestrict Location: 125915-126203 bp Feature: domain Description: Antirestrict Location: 12 5915-12 62 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)