myRT

myRT report for GCA_001031305.1_Kleb_pneu_CHS110_V1

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Seq: KQ088257.1 Klebsiella pneumoniae strain CHS110 genomic scaffold aetgR-supercont1.1, whole genome shotgun sequence (5577907 bp)
Overview 1 RT 1: 1024201-1029806 bp 2 RT 2: 1368971-1373577 bp 3 RT 3: 2938620-2945204 bp Neighborhood of RT #1 [1024201, 1029832] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1368971, 1373579] DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [2938620, 2945206] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1024201-1024764 bp Feature: domain Description: YbjK Location: 1024207-1024744 bp Feature: domain Description: YbjK Location: 1 024207-1 024744 bp Feature: gene Location: 1024887-1025939 bp Feature: domain Description: int Location: 1024890-1025889 bp Feature: domain Description: int Location: 1 024890-1 025889 bp Feature: gene Location: 1026355-1027842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1026760-1027450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 026760-1 027450 bp Feature: gene Location: 1027941-1028885 bp Feature: gene Location: 1028897-1029832 bp Feature: domain Description: Phage_CI_repr Location: 1028981-1029164 bp Feature: domain Description: Phage_CI_repr Location: 1 028981 -1 0291 64 bp Feature: domain Description: Phage_CI_repr Location: 1029293-1029485 bp Feature: domain Description: Phage_CI_repr Location: 1 029293-1 029485 bp Feature: domain Description: Phage_CI_C Location: 1029512-1029806 bp Feature: domain Description: Phage_CI_C Location: 1 02951 2-1 029806 bp Feature: gene Location: 1368971-1369213 bp Feature: domain Description: DinI Location: 1369022-1369202 bp Feature: domain Description: DinI Location: 1 369022-1 369202 bp Feature: gene Location: 1369706-1369876 bp Feature: gene Location: 1370326-1371813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1370731-1371421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 370731 -1 371 421 bp Feature: gene Location: 1371892-1372311 bp Feature: domain Description: PRK10276 Location: 1371895-1372306 bp Feature: domain Description: PRK1 0276 Location: 1 371 895-1 372306 bp Feature: gene Location: 1372314-1373579 bp Feature: domain Description: umuC Location: 1372317-1373577 bp Feature: domain Description: umuC Location: 1 37231 7-1 373577 bp Feature: gene Location: 2938620-2939678 bp Feature: domain Description: YccC Location: 2938626-2939664 bp Feature: domain Description: YccC Location: 2938626-2939664 bp Feature: gene Location: 2939777-2940250 bp Feature: domain Description: PRK10016 Location: 2939780-2940239 bp Feature: domain Description: PRK1 001 6 Location: 2939780-2940239 bp Feature: gene Location: 2940332-2941819 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2940737-2941427 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2940737-2941 427 bp Feature: gene Location: 2942438-2943601 bp Feature: domain Description: dacD Location: 2942441-2943596 bp Feature: domain Description: dacD Location: 2942441 -2943596 bp Feature: gene Location: 2943782-2945206 bp Feature: domain Description: SbcB Location: 2943788-2945204 bp Feature: domain Description: SbcB Location: 2943788-2945204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC)
dacD (PRK11397), SbcB (COG2925)

Seq: KQ088258.1 Klebsiella pneumoniae strain CHS110 genomic scaffold aetgR-supercont1.2, whole genome shotgun sequence (151449 bp)
Overview 1 RT 1: 84668-89662 bp Neighborhood of RT #1 [84668, 89664] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 84668-85939 bp Feature: domain Description: umuC Location: 84671-85934 bp Feature: domain Description: umuC Location: 84671-85934 bp Feature: gene Location: 85939-86364 bp Feature: domain Description: PRK10276 Location: 85942-86350 bp Feature: domain Description: PRK102 76 Location: 85942 -86350 bp Feature: gene Location: 86767-88254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87172-87862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87172 -87862 bp Feature: gene Location: 88488-88718 bp Feature: gene Location: 89239-89664 bp Feature: domain Description: Antirestrict Location: 89374-89662 bp Feature: domain Description: Antirestrict Location: 89374-89662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088260.1 Klebsiella pneumoniae strain CHS110 genomic scaffold aetgR-supercont1.4, whole genome shotgun sequence (53746 bp)
Overview 1 RT 1: 10699-16052 bp Neighborhood of RT #1 [10699, 16189] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 10699-11970 bp Feature: domain Description: umuC Location: 10702-11962 bp Feature: domain Description: umuC Location: 10702-11962 bp Feature: gene Location: 11970-12401 bp Feature: domain Description: PRK10276 Location: 12021-12384 bp Feature: domain Description: PRK10276 Location: 12021-123 84 bp Feature: gene Location: 12484-13971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12889-13579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12889-13 579 bp Feature: gene Location: 14544-15515 bp Feature: domain Description: StbA Location: 14547-15492 bp Feature: domain Description: StbA Location: 14547-15492 bp Feature: gene Location: 15518-16189 bp Feature: domain Description: Plasmid_stab_B Location: 15533-15740 bp Feature: domain Description: Plasmid_stab_B Location: 1553 3 -15740 bp Feature: domain Description: Plasmid_stab_B Location: 15845-16052 bp Feature: domain Description: Plasmid_stab_B Location: 15845-16052 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)