myRT

myRT report for GCA_001031315.1_Kleb_pneu_CHS111_V1

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Seq: KQ088265.1 Klebsiella pneumoniae strain CHS111 genomic scaffold aetzX-supercont1.1, whole genome shotgun sequence (1717545 bp)
Overview 1 RT 1: 725070-730675 bp 2 RT 2: 1068406-1073824 bp 3 RT 3: 1251727-1257592 bp Neighborhood of RT #1 [725070, 730701] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1068406, 1073826] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1251727, 1257594] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 725070-725633 bp Feature: domain Description: YbjK Location: 725076-725613 bp Feature: domain Description: YbjK Location: 725076-72561 3 bp Feature: gene Location: 725756-726808 bp Feature: domain Description: int Location: 725759-726758 bp Feature: domain Description: int Location: 725759-726758 bp Feature: gene Location: 727227-728711 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 727629-728319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 727629-72831 9 bp Feature: gene Location: 728810-729754 bp Feature: gene Location: 729766-730701 bp Feature: domain Description: Phage_CI_repr Location: 729850-730033 bp Feature: domain Description: Phage_CI_repr Location: 729850-730033 bp Feature: domain Description: Phage_CI_repr Location: 730162-730354 bp Feature: domain Description: Phage_CI_repr Location: 7301 62-730354 bp Feature: domain Description: Phage_CI_C Location: 730381-730675 bp Feature: domain Description: Phage_CI_C Location: 730381 -730675 bp Feature: gene Location: 1068406-1069545 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1068589-1069489 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 068589-1 069489 bp Feature: gene Location: 1069716-1069958 bp Feature: domain Description: DinI Location: 1069767-1069947 bp Feature: domain Description: DinI Location: 1 069767-1 069947 bp Feature: gene Location: 1070576-1072060 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1070978-1071668 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 070978-1 071 668 bp Feature: gene Location: 1072139-1072558 bp Feature: domain Description: PRK10276 Location: 1072142-1072553 bp Feature: domain Description: PRK1 0276 Location: 1 0721 42-1 072553 bp Feature: gene Location: 1072561-1073826 bp Feature: domain Description: umuC Location: 1072564-1073824 bp Feature: domain Description: umuC Location: 1 072564-1 073824 bp Feature: gene Location: 1251727-1252431 bp Feature: domain Description: Rve Location: 1251730-1252375 bp Feature: domain Description: Rve Location: 1 251 730-1 252375 bp Feature: gene Location: 1252497-1252946 bp Feature: domain Description: PinE Location: 1252506-1252938 bp Feature: domain Description: PinE Location: 1 252506-1 252938 bp Feature: gene Location: 1254344-1255828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1254746-1255436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 254746-1 255436 bp Feature: gene Location: 1255821-1256327 bp Feature: domain Description: PRK10276 Location: 1255911-1256322 bp Feature: domain Description: PRK1 0276 Location: 1 25591 1 -1 256322 bp Feature: gene Location: 1256329-1257594 bp Feature: domain Description: umuC Location: 1256332-1257592 bp Feature: domain Description: umuC Location: 1 256332-1 257592 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316)
PinE (COG1961)

Seq: KQ088271.1 Klebsiella pneumoniae strain CHS111 genomic scaffold aetzX-supercont1.7, whole genome shotgun sequence (193727 bp)
Overview 1 RT 1: 135939-141137 bp Neighborhood of RT #1 [135939, 141139] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 135939-137414 bp Feature: domain Description: umuC Location: 135942-137178 bp Feature: domain Description: umuC Location: 135942 -137178 bp Feature: gene Location: 137414-137839 bp Feature: domain Description: PRK10276 Location: 137417-137825 bp Feature: domain Description: PRK102 76 Location: 137417-13782 5 bp Feature: gene Location: 138245-139729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138647-139337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138647-139337 bp Feature: gene Location: 139963-140193 bp Feature: gene Location: 140714-141139 bp Feature: domain Description: Antirestrict Location: 140849-141137 bp Feature: domain Description: Antirestrict Location: 140849-141137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088266.1 Klebsiella pneumoniae strain CHS111 genomic scaffold aetzX-supercont1.2, whole genome shotgun sequence (1440716 bp)
Overview 1 RT 1: 884621-891104 bp Neighborhood of RT #1 [884621, 891106] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884621-885679 bp Feature: domain Description: YccC Location: 884627-885665 bp Feature: domain Description: YccC Location: 884627-885665 bp Feature: gene Location: 885778-886251 bp Feature: domain Description: PRK10016 Location: 885781-886240 bp Feature: domain Description: PRK10016 Location: 885781-886240 bp Feature: gene Location: 886333-887817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886735-887425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88673 5-887425 bp Feature: gene Location: 888338-889501 bp Feature: domain Description: dacD Location: 888341-889496 bp Feature: domain Description: dacD Location: 8883 41-889496 bp Feature: gene Location: 889682-891106 bp Feature: domain Description: SbcB Location: 889688-891104 bp Feature: domain Description: SbcB Location: 889688-891104 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)