myRT

myRT report for GCA_001031325.1_Kleb_pneu_CHS112_V1

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Seq: KQ088280.1 Klebsiella pneumoniae strain CHS112 genomic scaffold aetgO-supercont1.1, whole genome shotgun sequence (5276457 bp)
Overview 1 RT 1: 3723480-3728327 bp Neighborhood of RT #1 [3723480, 3728344] InsA DDE_Tnp_IS1 RVT-UG4 FimD FimC Feature: gene Location: 3723480-3723755 bp Ori: KLZ81639.1 Feature: domain Description: InsA Location: 3723486-3723750 bp Feature: domain Description: InsA Location: 3723486-3723750 bp Feature: gene Location: 3723800-3724177 bp Ori: KLZ81640.1 Feature: domain Description: DDE_Tnp_IS1 Location: 3723803-3724175 bp Feature: domain Description: DDE_Tnp_IS1 Location: 3723803-37241 75 bp Feature: gene Location: 3724112-3724942 bp Ori: KLZ81641.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3724523-3724865 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3724523-3724865 bp Feature: gene Location: 3724939-3727533 bp Ori: KLZ81642.1 Feature: domain Description: FimD Location: 3724981-3727522 bp Feature: domain Description: FimD Location: 3724981 -3727522 bp Feature: gene Location: 3727580-3728344 bp Ori: KLZ81643.1 Feature: domain Description: FimC Location: 3727625-3728327 bp Feature: domain Description: FimC Location: 3727625-3728327 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsA (COG3677), DDE_Tnp_IS1 (pfam03400), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: KQ088281.1 Klebsiella pneumoniae strain CHS112 genomic scaffold aetgO-supercont1.2, whole genome shotgun sequence (69402 bp)
Overview 1 RT 1: 53406-59347 bp Neighborhood of RT #1 [53406, 59347] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 53406-54677 bp Ori: KLZ75420.1 Feature: domain Description: umuC Location: 53409-54669 bp Feature: domain Description: umuC Location: 53409-54669 bp Feature: gene Location: 54677-55108 bp Ori: KLZ75421.1 Feature: domain Description: PRK10276 Location: 54728-55091 bp Feature: domain Description: PRK102 76 Location: 5472 8-55091 bp Feature: gene Location: 55517-57001 bp Ori: KLZ75422.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55919-56609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55919-56609 bp Feature: gene Location: 57471-58436 bp Ori: KLZ75423.1 Feature: domain Description: ArdC Location: 57597-58431 bp Feature: domain Description: ArdC Location: 57597-58431 bp Feature: gene Location: 58916-59347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)