myRT

myRT report for GCA_001031395.1_Kleb_pneu_CHS115_V1

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Seq: KQ088305.1 Klebsiella pneumoniae strain CHS115 genomic scaffold aetzg-supercont1.2, whole genome shotgun sequence (2035016 bp)
Overview 1 RT 1: 583599-587006 bp 2 RT 2: 1026350-1031955 bp 3 RT 3: 1370013-1375431 bp 4 RT 4: 1553540-1559405 bp Neighborhood of RT #1 [583599, 587107] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026350, 1031981] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370013, 1375433] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1553540, 1559407] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 583599-584330 bp Feature: domain Description: Laminin_G_3 Location: 583920-584274 bp Feature: domain Description: Laminin_G_3 Location: 583920-584274 bp Feature: gene Location: 584327-584536 bp Feature: gene Location: 584986-586473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585391-586081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585391 -586081 bp Feature: gene Location: 586551-586790 bp Feature: gene Location: 586790-587107 bp Feature: domain Description: PRK10276 Location: 586796-586910 bp Feature: domain Description: PRK1 0276 Location: 586796-58691 0 bp Feature: domain Description: PRK10276 Location: 586937-587006 bp Feature: domain Description: PRK1 0276 Location: 586937-587006 bp Feature: gene Location: 1026350-1026913 bp Feature: domain Description: YbjK Location: 1026356-1026893 bp Feature: domain Description: YbjK Location: 1 026356-1 026893 bp Feature: gene Location: 1027036-1028088 bp Feature: domain Description: int Location: 1027039-1028038 bp Feature: domain Description: int Location: 1 027039-1 028038 bp Feature: gene Location: 1028504-1029991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028909-1029599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 028909-1 029599 bp Feature: gene Location: 1030090-1031034 bp Feature: gene Location: 1031046-1031981 bp Feature: domain Description: Phage_CI_repr Location: 1031130-1031313 bp Feature: domain Description: Phage_CI_repr Location: 1 031 1 30-1 031 31 3 bp Feature: domain Description: Phage_CI_repr Location: 1031442-1031634 bp Feature: domain Description: Phage_CI_repr Location: 1 031 442-1 031 634 bp Feature: domain Description: Phage_CI_C Location: 1031661-1031955 bp Feature: domain Description: Phage_CI_C Location: 1 031 661 -1 031 955 bp Feature: gene Location: 1370013-1371152 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1370196-1371096 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 3701 96-1 371 096 bp Feature: gene Location: 1371323-1371565 bp Feature: domain Description: DinI Location: 1371374-1371554 bp Feature: domain Description: DinI Location: 1 371 374-1 371 554 bp Feature: gene Location: 1372180-1373667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372585-1373275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 372585-1 373275 bp Feature: gene Location: 1373746-1374165 bp Feature: domain Description: PRK10276 Location: 1373749-1374160 bp Feature: domain Description: PRK1 0276 Location: 1 373749-1 3741 60 bp Feature: gene Location: 1374168-1375433 bp Feature: domain Description: umuC Location: 1374171-1375431 bp Feature: domain Description: umuC Location: 1 3741 71 -1 375431 bp Feature: gene Location: 1553540-1554244 bp Feature: domain Description: Rve Location: 1553543-1554188 bp Feature: domain Description: Rve Location: 1 553543-1 5541 88 bp Feature: gene Location: 1554310-1554759 bp Feature: domain Description: PinE Location: 1554319-1554751 bp Feature: domain Description: PinE Location: 1 55431 9-1 554751 bp Feature: gene Location: 1556154-1557641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1556559-1557249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 556559-1 557249 bp Feature: gene Location: 1557634-1558140 bp Feature: domain Description: PRK10276 Location: 1557724-1558135 bp Feature: domain Description: PRK1 0276 Location: 1 557724-1 5581 35 bp Feature: gene Location: 1558142-1559407 bp Feature: domain Description: umuC Location: 1558145-1559405 bp Feature: domain Description: umuC Location: 1 5581 45-1 559405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ088304.1 Klebsiella pneumoniae strain CHS115 genomic scaffold aetzg-supercont1.1, whole genome shotgun sequence (3534150 bp)
Overview 1 RT 1: 892156-898639 bp Neighborhood of RT #1 [892156, 898641] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 892156-893214 bp Feature: domain Description: YccC Location: 892162-893200 bp Feature: domain Description: YccC Location: 892 162 -8932 00 bp Feature: gene Location: 893313-893786 bp Feature: domain Description: PRK10016 Location: 893316-893775 bp Feature: domain Description: PRK10016 Location: 893316-893775 bp Feature: gene Location: 893868-895355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 894273-894963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8942 73-894963 bp Feature: gene Location: 895873-897036 bp Feature: domain Description: dacD Location: 895876-897031 bp Feature: domain Description: dacD Location: 895876-897031 bp Feature: gene Location: 897217-898641 bp Feature: domain Description: SbcB Location: 897223-898639 bp Feature: domain Description: SbcB Location: 8972 2 3-898639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088307.1 Klebsiella pneumoniae strain CHS115 genomic scaffold aetzg-supercont1.4, whole genome shotgun sequence (73671 bp)
Overview 1 RT 1: 27712-33065 bp Neighborhood of RT #1 [27712, 33202] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 27712-28983 bp Feature: domain Description: umuC Location: 27715-28975 bp Feature: domain Description: umuC Location: 27715-28975 bp Feature: gene Location: 28983-29414 bp Feature: domain Description: PRK10276 Location: 29034-29397 bp Feature: domain Description: PRK10276 Location: 2903 4-293 97 bp Feature: gene Location: 29497-30984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29902-30592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29902-3 0592 bp Feature: gene Location: 31557-32528 bp Feature: domain Description: StbA Location: 31560-32505 bp Feature: domain Description: StbA Location: 3 1560-3 2505 bp Feature: gene Location: 32531-33202 bp Feature: domain Description: Plasmid_stab_B Location: 32546-32753 bp Feature: domain Description: Plasmid_stab_B Location: 3 2546-3 2753 bp Feature: domain Description: Plasmid_stab_B Location: 32858-33065 bp Feature: domain Description: Plasmid_stab_B Location: 3 2858-3 3 065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ088306.1 Klebsiella pneumoniae strain CHS115 genomic scaffold aetzg-supercont1.3, whole genome shotgun sequence (150550 bp)
Overview 1 RT 1: 71668-76662 bp Neighborhood of RT #1 [71668, 76664] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 71668-72939 bp Feature: domain Description: umuC Location: 71671-72934 bp Feature: domain Description: umuC Location: 71671-72934 bp Feature: gene Location: 72939-73364 bp Feature: domain Description: PRK10276 Location: 72942-73350 bp Feature: domain Description: PRK10276 Location: 7294 2-73350 bp Feature: gene Location: 73767-75254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74172-74862 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74 172-74 862 bp Feature: gene Location: 75488-75718 bp Feature: gene Location: 76239-76664 bp Feature: domain Description: Antirestrict Location: 76374-76662 bp Feature: domain Description: Antirestrict Location: 76374 -76662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)