myRT

myRT report for GCA_001031405.1_Kleb_pneu_CHS116_V1

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Seq: KQ088313.1 Klebsiella pneumoniae strain CHS116 genomic scaffold aetym-supercont1.3, whole genome shotgun sequence (139757 bp)
Overview 1 RT 1: 82171-86441 bp Neighborhood of RT #1 [82171, 86441] umuC PRK10276 RVT-GII Feature: gene Location: 82171-83442 bp Feature: domain Description: umuC Location: 82174-83437 bp Feature: domain Description: umuC Location: 821 74-83437 bp Feature: gene Location: 83442-83867 bp Feature: domain Description: PRK10276 Location: 83445-83853 bp Feature: domain Description: PRK1 0276 Location: 83445-83853 bp Feature: gene Location: 84270-85757 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84675-85365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84675-85365 bp Feature: gene Location: 85990-86220 bp Feature: gene Location: 86223-86441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: KQ088311.1 Klebsiella pneumoniae strain CHS116 genomic scaffold aetym-supercont1.1, whole genome shotgun sequence (4833193 bp)
Overview 1 RT 1: 588463-591598 bp 2 RT 2: 1036395-1041902 bp 3 RT 3: 1373076-1378494 bp 4 RT 4: 1559337-1564804 bp 5 RT 5: 2935910-2942393 bp Neighborhood of RT #1 [588463, 591654] RVT-GII Laminin_G_3 Neighborhood of RT #2 [1036395, 1041907] dam Phage_GPA RVT-GII DinI Neighborhood of RT #3 [1373076, 1378496] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1559337, 1564806] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2935910, 2942395] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 588463-588702 bp Feature: gene Location: 589059-589475 bp Feature: gene Location: 589716-590267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 590121-590265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59012 1-5902 65 bp Feature: gene Location: 590717-590926 bp Feature: gene Location: 590923-591654 bp Feature: domain Description: Laminin_G_3 Location: 591244-591598 bp Feature: domain Description: Laminin_G_3 Location: 5912 44-591598 bp Feature: gene Location: 1036395-1037000 bp Feature: domain Description: dam Location: 1036401-1036923 bp Feature: domain Description: dam Location: 1036401-103692 3 bp Feature: gene Location: 1036997-1039411 bp Feature: domain Description: Phage_GPA Location: 1037561-1038527 bp Feature: domain Description: Phage_GPA Location: 1037561-103852 7 bp Feature: gene Location: 1039887-1041374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1040292-1040982 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10402 92 -1040982 bp Feature: gene Location: 1041475-1041663 bp Feature: gene Location: 1041674-1041907 bp Feature: domain Description: DinI Location: 1041716-1041902 bp Feature: domain Description: DinI Location: 1041716-1041902 bp Feature: gene Location: 1373076-1374215 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1373259-1374159 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13732 59-1374159 bp Feature: gene Location: 1374386-1374628 bp Feature: domain Description: DinI Location: 1374437-1374617 bp Feature: domain Description: DinI Location: 1374437-1374617 bp Feature: gene Location: 1375243-1376730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375648-1376338 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1375648-1376338 bp Feature: gene Location: 1376809-1377228 bp Feature: domain Description: PRK10276 Location: 1376812-1377223 bp Feature: domain Description: PRK102 76 Location: 1376812 -13772 2 3 bp Feature: gene Location: 1377231-1378496 bp Feature: domain Description: umuC Location: 1377234-1378494 bp Feature: domain Description: umuC Location: 13772 34-1378494 bp Feature: gene Location: 1559337-1559643 bp Feature: gene Location: 1559709-1560158 bp Feature: domain Description: PinE Location: 1559718-1560150 bp Feature: domain Description: PinE Location: 1559718-1560150 bp Feature: gene Location: 1561553-1563040 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561958-1562648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1561958-1562 648 bp Feature: gene Location: 1563033-1563539 bp Feature: domain Description: PRK10276 Location: 1563123-1563534 bp Feature: domain Description: PRK102 76 Location: 156312 3-1563534 bp Feature: gene Location: 1563541-1564806 bp Feature: domain Description: umuC Location: 1563544-1564804 bp Feature: domain Description: umuC Location: 1563544-1564804 bp Feature: gene Location: 2935910-2936968 bp Feature: domain Description: YccC Location: 2935916-2936954 bp Feature: domain Description: YccC Location: 2 935916-2 936954 bp Feature: gene Location: 2937067-2937540 bp Feature: domain Description: PRK10016 Location: 2937070-2937529 bp Feature: domain Description: PRK10016 Location: 2 937070-2 93752 9 bp Feature: gene Location: 2937622-2939109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2938027-2938717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 93802 7-2 938717 bp Feature: gene Location: 2939627-2940790 bp Feature: domain Description: dacD Location: 2939630-2940785 bp Feature: domain Description: dacD Location: 2 939630-2 940785 bp Feature: gene Location: 2940971-2942395 bp Feature: domain Description: SbcB Location: 2940977-2942393 bp Feature: domain Description: SbcB Location: 2 940977-2 942 393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Laminin_G_3 (pfam13385), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961), YccC (COG1289)
PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)