myRT

myRT report for GCA_001031465.1_Kleb_pneu_CHS118_V1

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Seq: KQ088330.1 Klebsiella pneumoniae strain CHS118 genomic scaffold aetAh-supercont1.1, whole genome shotgun sequence (3540150 bp)
Overview 1 RT 1: 883802-890285 bp Neighborhood of RT #1 [883802, 890287] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883802-884860 bp Feature: domain Description: YccC Location: 883808-884846 bp Feature: domain Description: YccC Location: 883808-884846 bp Feature: gene Location: 884959-885432 bp Feature: domain Description: PRK10016 Location: 884962-885421 bp Feature: domain Description: PRK1 001 6 Location: 884962-885421 bp Feature: gene Location: 885514-887001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885919-886609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88591 9-886609 bp Feature: gene Location: 887519-888682 bp Feature: domain Description: dacD Location: 887522-888677 bp Feature: domain Description: dacD Location: 887522-888677 bp Feature: gene Location: 888863-890287 bp Feature: domain Description: SbcB Location: 888869-890285 bp Feature: domain Description: SbcB Location: 888869-890285 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088331.1 Klebsiella pneumoniae strain CHS118 genomic scaffold aetAh-supercont1.2, whole genome shotgun sequence (2035671 bp)
Overview 1 RT 1: 583395-586802 bp 2 RT 2: 1026044-1031649 bp 3 RT 3: 1369330-1374748 bp 4 RT 4: 1554849-1560275 bp Neighborhood of RT #1 [583395, 586903] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026044, 1031675] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369330, 1374750] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554849, 1560277] PinE RVT-GII PRK10276 umuC Feature: gene Location: 583395-584126 bp Feature: domain Description: Laminin_G_3 Location: 583716-584070 bp Feature: domain Description: Laminin_G_3 Location: 583716-584070 bp Feature: gene Location: 584123-584332 bp Feature: gene Location: 584782-586269 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585187-585877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585187-585877 bp Feature: gene Location: 586347-586586 bp Feature: gene Location: 586586-586903 bp Feature: domain Description: PRK10276 Location: 586592-586706 bp Feature: domain Description: PRK102 76 Location: 586592 -586706 bp Feature: domain Description: PRK10276 Location: 586733-586802 bp Feature: domain Description: PRK102 76 Location: 586733-586802 bp Feature: gene Location: 1026044-1026607 bp Feature: domain Description: YbjK Location: 1026050-1026587 bp Feature: domain Description: YbjK Location: 102 6050-102 6587 bp Feature: gene Location: 1026730-1027782 bp Feature: domain Description: int Location: 1026733-1027732 bp Feature: domain Description: int Location: 102 6733-102 7732 bp Feature: gene Location: 1028198-1029685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028603-1029293 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8603-102 92 93 bp Feature: gene Location: 1029784-1030728 bp Feature: gene Location: 1030740-1031675 bp Feature: domain Description: Phage_CI_repr Location: 1030824-1031007 bp Feature: domain Description: Phage_CI_repr Location: 103082 4-1031007 bp Feature: domain Description: Phage_CI_repr Location: 1031136-1031328 bp Feature: domain Description: Phage_CI_repr Location: 1031136-103132 8 bp Feature: domain Description: Phage_CI_C Location: 1031355-1031649 bp Feature: domain Description: Phage_CI_C Location: 1031355-1031649 bp Feature: gene Location: 1369330-1370469 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369513-1370413 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369513-1370413 bp Feature: gene Location: 1370640-1370882 bp Feature: domain Description: DinI Location: 1370691-1370871 bp Feature: domain Description: DinI Location: 1370691-1370871 bp Feature: gene Location: 1371497-1372984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371902-1372592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371902 -1372 592 bp Feature: gene Location: 1373063-1373482 bp Feature: domain Description: PRK10276 Location: 1373066-1373477 bp Feature: domain Description: PRK102 76 Location: 1373066-1373477 bp Feature: gene Location: 1373485-1374750 bp Feature: domain Description: umuC Location: 1373488-1374748 bp Feature: domain Description: umuC Location: 1373488-1374748 bp Feature: gene Location: 1554849-1555114 bp Feature: gene Location: 1555180-1555629 bp Feature: domain Description: PinE Location: 1555189-1555621 bp Feature: domain Description: PinE Location: 1555189-155562 1 bp Feature: gene Location: 1557024-1558511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557429-1558119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 155742 9-1558119 bp Feature: gene Location: 1558504-1559010 bp Feature: domain Description: PRK10276 Location: 1558594-1559005 bp Feature: domain Description: PRK102 76 Location: 1558594-1559005 bp Feature: gene Location: 1559012-1560277 bp Feature: domain Description: umuC Location: 1559015-1560275 bp Feature: domain Description: umuC Location: 1559015-15602 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)

Seq: KQ088332.1 Klebsiella pneumoniae strain CHS118 genomic scaffold aetAh-supercont1.3, whole genome shotgun sequence (136813 bp)
Overview 1 RT 1: 79229-84223 bp Neighborhood of RT #1 [79229, 84225] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 79229-80500 bp Feature: domain Description: umuC Location: 79232-80495 bp Feature: domain Description: umuC Location: 7923 2-80495 bp Feature: gene Location: 80500-80925 bp Feature: domain Description: PRK10276 Location: 80503-80911 bp Feature: domain Description: PRK10276 Location: 80503 -80911 bp Feature: gene Location: 81328-82815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81733-82423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8173 3 -82423 bp Feature: gene Location: 83049-83279 bp Feature: gene Location: 83800-84225 bp Feature: domain Description: Antirestrict Location: 83935-84223 bp Feature: domain Description: Antirestrict Location: 83 93 5-84223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)