myRT

myRT report for GCA_001031475.1_Kleb_pneu_CHS121_V1

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Seq: KQ088337.1 Klebsiella pneumoniae strain CHS121 genomic scaffold aetzB-supercont1.1, whole genome shotgun sequence (5389712 bp)
Overview 1 RT 1: 3823508-3832538 bp Neighborhood of RT #1 [3823508, 3832555] BcsQ PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 3823508-3824383 bp Ori: KMA24982.1 Feature: domain Description: BcsQ Location: 3823511-3824339 bp Feature: domain Description: BcsQ Location: 382351 1 -3824339 bp Feature: gene Location: 3825451-3826314 bp Ori: KMA24983.1 Feature: domain Description: PRK09692 Location: 3825475-3826312 bp Feature: domain Description: PRK09692 Location: 3825475-382631 2 bp Feature: gene Location: 3827072-3829153 bp Ori: KMA24984.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3827483-3827927 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3827483-3827927 bp Feature: gene Location: 3829150-3831744 bp Ori: KMA24985.1 Feature: domain Description: FimD Location: 3829192-3831733 bp Feature: domain Description: FimD Location: 38291 92-3831 733 bp Feature: gene Location: 3831791-3832555 bp Ori: KMA24986.1 Feature: domain Description: FimC Location: 3831836-3832538 bp Feature: domain Description: FimC Location: 3831 836-3832538 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BcsQ (COG1192), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: KQ088338.1 Klebsiella pneumoniae strain CHS121 genomic scaffold aetzB-supercont1.2, whole genome shotgun sequence (244328 bp)
Overview 1 RT 1: 185363-190379 bp Neighborhood of RT #1 [185363, 190381] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 185363-186634 bp Ori: KMA19394.1 Feature: domain Description: umuC Location: 185366-186629 bp Feature: domain Description: umuC Location: 185366-18662 9 bp Feature: gene Location: 186634-187059 bp Ori: KMA19395.1 Feature: domain Description: PRK10276 Location: 186637-187045 bp Feature: domain Description: PRK102 76 Location: 186637-187045 bp Feature: gene Location: 187539-188972 bp Ori: KMA19396.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187866-188580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187866-188580 bp Feature: gene Location: 189206-189436 bp Feature: gene Location: 189956-190381 bp Ori: KMA19398.1 Feature: domain Description: Antirestrict Location: 190091-190379 bp Feature: domain Description: Antirestrict Location: 190091-190379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)