myRT

myRT report for GCA_001031545.1_Kleb_pneu_CHS126_V1

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Seq: KQ088365.1 Klebsiella pneumoniae strain CHS126 genomic scaffold aetAb-supercont1.3, whole genome shotgun sequence (163049 bp)
Overview 1 RT 1: 145166-150160 bp Neighborhood of RT #1 [145166, 150162] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 145166-146437 bp Feature: domain Description: umuC Location: 145169-146432 bp Feature: domain Description: umuC Location: 1 451 69-1 46432 bp Feature: gene Location: 146437-146862 bp Feature: domain Description: PRK10276 Location: 146440-146848 bp Feature: domain Description: PRK1 0276 Location: 1 46440-1 46848 bp Feature: gene Location: 147265-148752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147670-148360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 47670-1 48360 bp Feature: gene Location: 148986-149216 bp Feature: gene Location: 149737-150162 bp Feature: domain Description: Antirestrict Location: 149872-150160 bp Feature: domain Description: Antirestrict Location: 1 49872-1 501 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088363.1 Klebsiella pneumoniae strain CHS126 genomic scaffold aetAb-supercont1.1, whole genome shotgun sequence (3534379 bp)
Overview 1 RT 1: 885107-891590 bp Neighborhood of RT #1 [885107, 891592] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 885107-886165 bp Feature: domain Description: YccC Location: 885113-886151 bp Feature: domain Description: YccC Location: 885113-886151 bp Feature: gene Location: 886264-886737 bp Feature: domain Description: PRK10016 Location: 886267-886726 bp Feature: domain Description: PRK10016 Location: 8862 67-88672 6 bp Feature: gene Location: 886819-888306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 887224-887914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8872 2 4-887914 bp Feature: gene Location: 888824-889987 bp Feature: domain Description: dacD Location: 888827-889982 bp Feature: domain Description: dacD Location: 88882 7-889982 bp Feature: gene Location: 890168-891592 bp Feature: domain Description: SbcB Location: 890174-891590 bp Feature: domain Description: SbcB Location: 890174-891590 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088366.1 Klebsiella pneumoniae strain CHS126 genomic scaffold aetAb-supercont1.4, whole genome shotgun sequence (71118 bp)
Overview 1 RT 1: 29312-34665 bp Neighborhood of RT #1 [29312, 34802] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 29312-30583 bp Feature: domain Description: umuC Location: 29315-30575 bp Feature: domain Description: umuC Location: 293 15-3 0575 bp Feature: gene Location: 30583-31014 bp Feature: domain Description: PRK10276 Location: 30634-30997 bp Feature: domain Description: PRK10276 Location: 3 063 4-3 0997 bp Feature: gene Location: 31097-32584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31502-32192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 1502-3 2192 bp Feature: gene Location: 33157-34128 bp Feature: domain Description: StbA Location: 33160-34105 bp Feature: domain Description: StbA Location: 3 3 160-3 4105 bp Feature: gene Location: 34131-34802 bp Feature: domain Description: Plasmid_stab_B Location: 34146-34353 bp Feature: domain Description: Plasmid_stab_B Location: 3 4146-3 43 53 bp Feature: domain Description: Plasmid_stab_B Location: 34458-34665 bp Feature: domain Description: Plasmid_stab_B Location: 3 4458-3 4665 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)

Seq: KQ088364.1 Klebsiella pneumoniae strain CHS126 genomic scaffold aetAb-supercont1.2, whole genome shotgun sequence (2130874 bp)
Overview 1 RT 1: 583850-587257 bp 2 RT 2: 1026490-1032095 bp 3 RT 3: 1460620-1466038 bp 4 RT 4: 1644222-1649511 bp Neighborhood of RT #1 [583850, 587358] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026490, 1032121] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1460620, 1466040] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1644222, 1649513] PinE RVT-GII PRK10276 umuC Feature: gene Location: 583850-584581 bp Feature: domain Description: Laminin_G_3 Location: 584171-584525 bp Feature: domain Description: Laminin_G_3 Location: 584 171-584 525 bp Feature: gene Location: 584578-584787 bp Feature: gene Location: 585237-586724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585642-586332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58564 2-586332 bp Feature: gene Location: 586802-587041 bp Feature: gene Location: 587041-587358 bp Feature: domain Description: PRK10276 Location: 587047-587161 bp Feature: domain Description: PRK10276 Location: 58704 7-587161 bp Feature: domain Description: PRK10276 Location: 587188-587257 bp Feature: domain Description: PRK10276 Location: 587188-587257 bp Feature: gene Location: 1026490-1027053 bp Feature: domain Description: YbjK Location: 1026496-1027033 bp Feature: domain Description: YbjK Location: 10264 96-1027033 bp Feature: gene Location: 1027176-1028228 bp Feature: domain Description: int Location: 1027179-1028178 bp Feature: domain Description: int Location: 1027179-1028178 bp Feature: gene Location: 1028644-1030131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1029049-1029739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102904 9-1029739 bp Feature: gene Location: 1030230-1031174 bp Feature: gene Location: 1031186-1032121 bp Feature: domain Description: Phage_CI_repr Location: 1031270-1031453 bp Feature: domain Description: Phage_CI_repr Location: 1031270-10314 53 bp Feature: domain Description: Phage_CI_repr Location: 1031582-1031774 bp Feature: domain Description: Phage_CI_repr Location: 1031582-1031774 bp Feature: domain Description: Phage_CI_C Location: 1031801-1032095 bp Feature: domain Description: Phage_CI_C Location: 1031801-1032095 bp Feature: gene Location: 1460620-1461759 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1460803-1461703 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 14 60803-14 61703 bp Feature: gene Location: 1461930-1462172 bp Feature: domain Description: DinI Location: 1461981-1462161 bp Feature: domain Description: DinI Location: 14 61981-14 62161 bp Feature: gene Location: 1462787-1464274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1463192-1463882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 63192-14 63882 bp Feature: gene Location: 1464353-1464772 bp Feature: domain Description: PRK10276 Location: 1464356-1464767 bp Feature: domain Description: PRK10276 Location: 14 64 356-14 64 767 bp Feature: gene Location: 1464775-1466040 bp Feature: domain Description: umuC Location: 1464778-1466038 bp Feature: domain Description: umuC Location: 14 64 778-14 66038 bp Feature: gene Location: 1644222-1644350 bp Feature: gene Location: 1644416-1644865 bp Feature: domain Description: PinE Location: 1644425-1644857 bp Feature: domain Description: PinE Location: 164 4 4 25-164 4 857 bp Feature: gene Location: 1646260-1647747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1646665-1647355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 164 6665-164 7355 bp Feature: gene Location: 1647740-1648246 bp Feature: domain Description: PRK10276 Location: 1647830-1648241 bp Feature: domain Description: PRK10276 Location: 164 7830-164 824 1 bp Feature: gene Location: 1648248-1649513 bp Feature: domain Description: umuC Location: 1648251-1649511 bp Feature: domain Description: umuC Location: 164 8251-164 9511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961)