myRT

myRT report for GCA_001031555.1_Kleb_pneu_CHS125_V1

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Seq: KQ088358.1 Klebsiella pneumoniae strain CHS125 genomic scaffold aetyl-supercont1.3, whole genome shotgun sequence (203039 bp)
Overview 1 RT 1: 64422-69416 bp Neighborhood of RT #1 [64422, 69418] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 64422-65693 bp Feature: domain Description: umuC Location: 64425-65688 bp Feature: domain Description: umuC Location: 64425-65688 bp Feature: gene Location: 65693-66118 bp Feature: domain Description: PRK10276 Location: 65696-66104 bp Feature: domain Description: PRK1 0276 Location: 65696-661 04 bp Feature: gene Location: 66521-68008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66926-67616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66926-6761 6 bp Feature: gene Location: 68242-68472 bp Feature: gene Location: 68993-69418 bp Feature: domain Description: Antirestrict Location: 69128-69416 bp Feature: domain Description: Antirestrict Location: 691 28-6941 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088356.1 Klebsiella pneumoniae strain CHS125 genomic scaffold aetyl-supercont1.1, whole genome shotgun sequence (4916296 bp)
Overview 1 RT 1: 587722-591129 bp 2 RT 2: 1030246-1035851 bp 3 RT 3: 1373823-1379241 bp 4 RT 4: 1558423-1563730 bp 5 RT 5: 2762168-2768651 bp Neighborhood of RT #1 [587722, 591230] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1030246, 1035877] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1373823, 1379243] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1558423, 1563732] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2762168, 2768653] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 587722-588453 bp Feature: domain Description: Laminin_G_3 Location: 588043-588397 bp Feature: domain Description: Laminin_G_3 Location: 588043-588397 bp Feature: gene Location: 588450-588659 bp Feature: gene Location: 589109-590596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589514-590204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589514-5902 04 bp Feature: gene Location: 590674-590913 bp Feature: gene Location: 590913-591230 bp Feature: domain Description: PRK10276 Location: 590919-591033 bp Feature: domain Description: PRK102 76 Location: 590919-591033 bp Feature: domain Description: PRK10276 Location: 591060-591129 bp Feature: domain Description: PRK102 76 Location: 591060-59112 9 bp Feature: gene Location: 1030246-1030809 bp Feature: domain Description: YbjK Location: 1030252-1030789 bp Feature: domain Description: YbjK Location: 10302 52 -1030789 bp Feature: gene Location: 1030932-1031984 bp Feature: domain Description: int Location: 1030935-1031934 bp Feature: domain Description: int Location: 1030935-1031934 bp Feature: gene Location: 1032400-1033887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032805-1033495 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1032 805-1033495 bp Feature: gene Location: 1033986-1034930 bp Feature: gene Location: 1034942-1035877 bp Feature: domain Description: Phage_CI_repr Location: 1035026-1035209 bp Feature: domain Description: Phage_CI_repr Location: 103502 6-10352 09 bp Feature: domain Description: Phage_CI_repr Location: 1035338-1035530 bp Feature: domain Description: Phage_CI_repr Location: 1035338-1035530 bp Feature: domain Description: Phage_CI_C Location: 1035557-1035851 bp Feature: domain Description: Phage_CI_C Location: 1035557-1035851 bp Feature: gene Location: 1373823-1374962 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1374006-1374906 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1374006-1374906 bp Feature: gene Location: 1375133-1375375 bp Feature: domain Description: DinI Location: 1375184-1375364 bp Feature: domain Description: DinI Location: 1375184-1375364 bp Feature: gene Location: 1375990-1377477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1376395-1377085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1376395-1377085 bp Feature: gene Location: 1377556-1377975 bp Feature: domain Description: PRK10276 Location: 1377559-1377970 bp Feature: domain Description: PRK102 76 Location: 1377559-1377970 bp Feature: gene Location: 1377978-1379243 bp Feature: domain Description: umuC Location: 1377981-1379241 bp Feature: domain Description: umuC Location: 1377981-13792 41 bp Feature: gene Location: 1558423-1558569 bp Feature: gene Location: 1558635-1559084 bp Feature: domain Description: PinE Location: 1558644-1559076 bp Feature: domain Description: PinE Location: 1558644-1559076 bp Feature: gene Location: 1560479-1561966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1560884-1561574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1560884-1561574 bp Feature: gene Location: 1561959-1562465 bp Feature: domain Description: PRK10276 Location: 1562049-1562460 bp Feature: domain Description: PRK102 76 Location: 1562 049-1562 460 bp Feature: gene Location: 1562467-1563732 bp Feature: domain Description: umuC Location: 1562470-1563730 bp Feature: domain Description: umuC Location: 1562 470-1563730 bp Feature: gene Location: 2762168-2763226 bp Feature: domain Description: YccC Location: 2762174-2763212 bp Feature: domain Description: YccC Location: 2 762 174-2 7632 12 bp Feature: gene Location: 2763325-2763798 bp Feature: domain Description: PRK10016 Location: 2763328-2763787 bp Feature: domain Description: PRK10016 Location: 2 76332 8-2 763787 bp Feature: gene Location: 2763880-2765367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2764285-2764975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7642 85-2 764975 bp Feature: gene Location: 2765885-2767048 bp Feature: domain Description: dacD Location: 2765888-2767043 bp Feature: domain Description: dacD Location: 2 765888-2 767043 bp Feature: gene Location: 2767229-2768653 bp Feature: domain Description: SbcB Location: 2767235-2768651 bp Feature: domain Description: SbcB Location: 2 7672 35-2 768651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)