myRT

myRT report for GCA_001031565.1_Kleb_pneu_CHS127_V1

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Seq: KQ088372.1 Klebsiella pneumoniae strain CHS127 genomic scaffold aetze-supercont1.3, whole genome shotgun sequence (127311 bp)
Overview 1 RT 1: 69727-74721 bp Neighborhood of RT #1 [69727, 74723] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 69727-70998 bp Feature: domain Description: umuC Location: 69730-70993 bp Feature: domain Description: umuC Location: 69730-70993 bp Feature: gene Location: 70998-71423 bp Feature: domain Description: PRK10276 Location: 71001-71409 bp Feature: domain Description: PRK1 0276 Location: 71 001 -71 409 bp Feature: gene Location: 71826-73313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72231-72921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72231 -72921 bp Feature: gene Location: 73547-73777 bp Feature: gene Location: 74298-74723 bp Feature: domain Description: Antirestrict Location: 74433-74721 bp Feature: domain Description: Antirestrict Location: 74433-74721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088370.1 Klebsiella pneumoniae strain CHS127 genomic scaffold aetze-supercont1.1, whole genome shotgun sequence (4776830 bp)
Overview 1 RT 1: 583025-586432 bp 2 RT 2: 1025667-1031272 bp 3 RT 3: 1369468-1374886 bp 4 RT 4: 1558464-1563819 bp 5 RT 5: 2761837-2768320 bp Neighborhood of RT #1 [583025, 586533] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1025667, 1031298] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369468, 1374888] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1558464, 1563821] DDE_Tnp_IS240 PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2761837, 2768322] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583025-583756 bp Feature: domain Description: Laminin_G_3 Location: 583346-583700 bp Feature: domain Description: Laminin_G_3 Location: 583346-583700 bp Feature: gene Location: 583753-583962 bp Feature: gene Location: 584412-585899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584817-585507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 584817-585507 bp Feature: gene Location: 585977-586216 bp Feature: gene Location: 586216-586533 bp Feature: domain Description: PRK10276 Location: 586222-586336 bp Feature: domain Description: PRK102 76 Location: 5862 2 2 -586336 bp Feature: domain Description: PRK10276 Location: 586363-586432 bp Feature: domain Description: PRK102 76 Location: 586363-586432 bp Feature: gene Location: 1025667-1026230 bp Feature: domain Description: YbjK Location: 1025673-1026210 bp Feature: domain Description: YbjK Location: 102 5673-102 62 10 bp Feature: gene Location: 1026353-1027405 bp Feature: domain Description: int Location: 1026356-1027355 bp Feature: domain Description: int Location: 102 6356-102 7355 bp Feature: gene Location: 1027821-1029308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028226-1028916 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 82 2 6-102 8916 bp Feature: gene Location: 1029407-1030351 bp Feature: gene Location: 1030363-1031298 bp Feature: domain Description: Phage_CI_repr Location: 1030447-1030630 bp Feature: domain Description: Phage_CI_repr Location: 1030447-1030630 bp Feature: domain Description: Phage_CI_repr Location: 1030759-1030951 bp Feature: domain Description: Phage_CI_repr Location: 1030759-1030951 bp Feature: domain Description: Phage_CI_C Location: 1030978-1031272 bp Feature: domain Description: Phage_CI_C Location: 1030978-10312 72 bp Feature: gene Location: 1369468-1370607 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369651-1370551 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369651-1370551 bp Feature: gene Location: 1370778-1371020 bp Feature: domain Description: DinI Location: 1370829-1371009 bp Feature: domain Description: DinI Location: 137082 9-1371009 bp Feature: gene Location: 1371635-1373122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372040-1372730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372 040-1372 730 bp Feature: gene Location: 1373201-1373620 bp Feature: domain Description: PRK10276 Location: 1373204-1373615 bp Feature: domain Description: PRK102 76 Location: 13732 04-1373615 bp Feature: gene Location: 1373623-1374888 bp Feature: domain Description: umuC Location: 1373626-1374886 bp Feature: domain Description: umuC Location: 137362 6-1374886 bp Feature: gene Location: 1558464-1558658 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1558470-1558590 bp Feature: domain Description: DDE_Tnp_IS2 40 Location: 1558470-1558590 bp Feature: gene Location: 1558724-1559173 bp Feature: domain Description: PinE Location: 1558733-1559165 bp Feature: domain Description: PinE Location: 1558733-1559165 bp Feature: gene Location: 1560568-1562055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1560973-1561663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1560973-1561663 bp Feature: gene Location: 1562048-1562554 bp Feature: domain Description: PRK10276 Location: 1562138-1562549 bp Feature: domain Description: PRK102 76 Location: 1562 138-1562 549 bp Feature: gene Location: 1562556-1563821 bp Feature: domain Description: umuC Location: 1562559-1563819 bp Feature: domain Description: umuC Location: 1562 559-1563819 bp Feature: gene Location: 2761837-2762895 bp Feature: domain Description: YccC Location: 2761843-2762881 bp Feature: domain Description: YccC Location: 2 761843-2 762 881 bp Feature: gene Location: 2762994-2763467 bp Feature: domain Description: PRK10016 Location: 2762997-2763456 bp Feature: domain Description: PRK10016 Location: 2 762 997-2 763456 bp Feature: gene Location: 2763549-2765036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2763954-2764644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 763954-2 764644 bp Feature: gene Location: 2765554-2766717 bp Feature: domain Description: dacD Location: 2765557-2766712 bp Feature: domain Description: dacD Location: 2 765557-2 766712 bp Feature: gene Location: 2766898-2768322 bp Feature: domain Description: SbcB Location: 2766904-2768320 bp Feature: domain Description: SbcB Location: 2 766904-2 76832 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
DDE_Tnp_IS240 (pfam13610), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)