myRT

myRT report for GCA_001031595.1_Kleb_pneu_CHS128_V1

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Seq: KQ088378.1 Klebsiella pneumoniae strain CHS128 genomic scaffold aetAi-supercont1.1, whole genome shotgun sequence (1786625 bp)
Overview 1 RT 1: 330802-334209 bp 2 RT 2: 773442-779047 bp 3 RT 3: 1116909-1122327 bp 4 RT 4: 1302874-1308739 bp Neighborhood of RT #1 [330802, 334310] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [773442, 779073] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1116909, 1122329] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1302874, 1308741] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 330802-331533 bp Feature: domain Description: Laminin_G_3 Location: 331123-331477 bp Feature: domain Description: Laminin_G_3 Location: 331 1 23-331 477 bp Feature: gene Location: 331530-331739 bp Feature: gene Location: 332189-333676 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332594-333284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332594-333284 bp Feature: gene Location: 333754-333993 bp Feature: gene Location: 333993-334310 bp Feature: domain Description: PRK10276 Location: 333999-334113 bp Feature: domain Description: PRK1 0276 Location: 333999-3341 1 3 bp Feature: domain Description: PRK10276 Location: 334140-334209 bp Feature: domain Description: PRK1 0276 Location: 3341 40-334209 bp Feature: gene Location: 773442-774005 bp Feature: domain Description: YbjK Location: 773448-773985 bp Feature: domain Description: YbjK Location: 773448-773985 bp Feature: gene Location: 774128-775180 bp Feature: domain Description: int Location: 774131-775130 bp Feature: domain Description: int Location: 7741 31 -7751 30 bp Feature: gene Location: 775596-777083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776001-776691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 776001 -776691 bp Feature: gene Location: 777182-778126 bp Feature: gene Location: 778138-779073 bp Feature: domain Description: Phage_CI_repr Location: 778222-778405 bp Feature: domain Description: Phage_CI_repr Location: 778222-778405 bp Feature: domain Description: Phage_CI_repr Location: 778534-778726 bp Feature: domain Description: Phage_CI_repr Location: 778534-778726 bp Feature: domain Description: Phage_CI_C Location: 778753-779047 bp Feature: domain Description: Phage_CI_C Location: 778753-779047 bp Feature: gene Location: 1116909-1118048 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1117092-1117992 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 1 7092-1 1 1 7992 bp Feature: gene Location: 1118219-1118461 bp Feature: domain Description: DinI Location: 1118270-1118450 bp Feature: domain Description: DinI Location: 1 1 1 8270-1 1 1 8450 bp Feature: gene Location: 1119076-1120563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1119481-1120171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 9481 -1 1 201 71 bp Feature: gene Location: 1120642-1121061 bp Feature: domain Description: PRK10276 Location: 1120645-1121056 bp Feature: domain Description: PRK1 0276 Location: 1 1 20645-1 1 21 056 bp Feature: gene Location: 1121064-1122329 bp Feature: domain Description: umuC Location: 1121067-1122327 bp Feature: domain Description: umuC Location: 1 1 21 067-1 1 22327 bp Feature: gene Location: 1302874-1303578 bp Feature: domain Description: Rve Location: 1302877-1303522 bp Feature: domain Description: Rve Location: 1 302877-1 303522 bp Feature: gene Location: 1303644-1304093 bp Feature: domain Description: PinE Location: 1303653-1304085 bp Feature: domain Description: PinE Location: 1 303653-1 304085 bp Feature: gene Location: 1305488-1306975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1305893-1306583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 305893-1 306583 bp Feature: gene Location: 1306968-1307474 bp Feature: domain Description: PRK10276 Location: 1307058-1307469 bp Feature: domain Description: PRK1 0276 Location: 1 307058-1 307469 bp Feature: gene Location: 1307476-1308741 bp Feature: domain Description: umuC Location: 1307479-1308739 bp Feature: domain Description: umuC Location: 1 307479-1 308739 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)

Seq: KQ088379.1 Klebsiella pneumoniae strain CHS128 genomic scaffold aetAi-supercont1.2, whole genome shotgun sequence (1441989 bp)
Overview 1 RT 1: 887278-893761 bp Neighborhood of RT #1 [887278, 893763] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 887278-888336 bp Feature: domain Description: YccC Location: 887284-888322 bp Feature: domain Description: YccC Location: 8872 84-88832 2 bp Feature: gene Location: 888435-888908 bp Feature: domain Description: PRK10016 Location: 888438-888897 bp Feature: domain Description: PRK10016 Location: 888438-888897 bp Feature: gene Location: 888990-890477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889395-890085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 889395-890085 bp Feature: gene Location: 890995-892158 bp Feature: domain Description: dacD Location: 890998-892153 bp Feature: domain Description: dacD Location: 890998-892 153 bp Feature: gene Location: 892339-893763 bp Feature: domain Description: SbcB Location: 892345-893761 bp Feature: domain Description: SbcB Location: 892 345-893761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088384.1 Klebsiella pneumoniae strain CHS128 genomic scaffold aetAi-supercont1.7, whole genome shotgun sequence (151206 bp)
Overview 1 RT 1: 130535-135529 bp Neighborhood of RT #1 [130535, 135531] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 130535-131806 bp Feature: domain Description: umuC Location: 130538-131801 bp Feature: domain Description: umuC Location: 13 053 8-13 1801 bp Feature: gene Location: 131806-132231 bp Feature: domain Description: PRK10276 Location: 131809-132217 bp Feature: domain Description: PRK10276 Location: 13 1809-13 2217 bp Feature: gene Location: 132634-134121 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 133039-133729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 3 03 9-13 3 729 bp Feature: gene Location: 134355-134585 bp Feature: gene Location: 135106-135531 bp Feature: domain Description: Antirestrict Location: 135241-135529 bp Feature: domain Description: Antirestrict Location: 13 5241-13 5529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088388.1 Klebsiella pneumoniae strain CHS128 genomic scaffold aetAi-supercont1.11, whole genome shotgun sequence (53569 bp)
Overview 1 RT 1: 10779-16132 bp Neighborhood of RT #1 [10779, 16269] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 10779-12050 bp Feature: domain Description: umuC Location: 10782-12042 bp Feature: domain Description: umuC Location: 10782-1204 2 bp Feature: gene Location: 12050-12481 bp Feature: domain Description: PRK10276 Location: 12101-12464 bp Feature: domain Description: PRK10276 Location: 12101-124 64 bp Feature: gene Location: 12564-14051 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12969-13659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12969-13659 bp Feature: gene Location: 14624-15595 bp Feature: domain Description: StbA Location: 14627-15572 bp Feature: domain Description: StbA Location: 14 627-15572 bp Feature: gene Location: 15598-16269 bp Feature: domain Description: Plasmid_stab_B Location: 15613-15820 bp Feature: domain Description: Plasmid_stab_B Location: 15613-15820 bp Feature: domain Description: Plasmid_stab_B Location: 15925-16132 bp Feature: domain Description: Plasmid_stab_B Location: 15925-16132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)