myRT

myRT report for GCA_001031625.1_Kleb_pneu_CHS129_V1

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Seq: KQ088412.1 Klebsiella pneumoniae strain CHS129 genomic scaffold aeusn-supercont1.6, whole genome shotgun sequence (136437 bp)
Overview 1 RT 1: 78699-83693 bp Neighborhood of RT #1 [78699, 83695] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 78699-79970 bp Feature: domain Description: umuC Location: 78702-79965 bp Feature: domain Description: umuC Location: 78702-79965 bp Feature: gene Location: 79970-80395 bp Feature: domain Description: PRK10276 Location: 79973-80381 bp Feature: domain Description: PRK1 0276 Location: 79973-80381 bp Feature: gene Location: 80798-82285 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81203-81893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 203-81 893 bp Feature: gene Location: 82519-82749 bp Feature: gene Location: 83270-83695 bp Feature: domain Description: Antirestrict Location: 83405-83693 bp Feature: domain Description: Antirestrict Location: 83405-83693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088407.1 Klebsiella pneumoniae strain CHS129 genomic scaffold aeusn-supercont1.1, whole genome shotgun sequence (3002766 bp)
Overview 1 RT 1: 333151-336558 bp 2 RT 2: 776171-781776 bp 3 RT 3: 784721-791828 bp 4 RT 4: 1123757-1129175 bp 5 RT 5: 1307284-1313149 bp 6 RT 6: 2448298-2454781 bp Neighborhood of RT #1 [333151, 336659] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [776171, 781802] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [784721, 791833] dam Phage_GPA RVT-GII RVT-GII DinI Neighborhood of RT #4 [1123757, 1129177] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #5 [1307284, 1313151] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #6 [2448298, 2454783] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 333151-333882 bp Feature: domain Description: Laminin_G_3 Location: 333472-333826 bp Feature: domain Description: Laminin_G_3 Location: 333472 -33382 6 bp Feature: gene Location: 333879-334088 bp Feature: gene Location: 334538-336025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334943-335633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334943-335633 bp Feature: gene Location: 336103-336342 bp Feature: gene Location: 336342-336659 bp Feature: domain Description: PRK10276 Location: 336348-336462 bp Feature: domain Description: PRK102 76 Location: 336348-336462 bp Feature: domain Description: PRK10276 Location: 336489-336558 bp Feature: domain Description: PRK102 76 Location: 336489-336558 bp Feature: gene Location: 776171-776734 bp Feature: domain Description: YbjK Location: 776177-776714 bp Feature: domain Description: YbjK Location: 776177-776714 bp Feature: gene Location: 776857-777909 bp Feature: domain Description: int Location: 776860-777859 bp Feature: domain Description: int Location: 776860-777859 bp Feature: gene Location: 778325-779812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778730-779420 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778730-77942 0 bp Feature: gene Location: 779911-780855 bp Feature: gene Location: 780867-781802 bp Feature: domain Description: Phage_CI_repr Location: 780951-781134 bp Feature: domain Description: Phage_CI_repr Location: 780951-781134 bp Feature: domain Description: Phage_CI_repr Location: 781263-781455 bp Feature: domain Description: Phage_CI_repr Location: 7812 63-781455 bp Feature: domain Description: Phage_CI_C Location: 781482-781776 bp Feature: domain Description: Phage_CI_C Location: 781482 -781776 bp Feature: gene Location: 784721-785326 bp Feature: domain Description: dam Location: 784727-785249 bp Feature: domain Description: dam Location: 78472 7-7852 49 bp Feature: gene Location: 785323-787737 bp Feature: domain Description: Phage_GPA Location: 785887-786853 bp Feature: domain Description: Phage_GPA Location: 785887-786853 bp Feature: gene Location: 788213-789469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788618-789308 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 788618-789308 bp Feature: gene Location: 789813-791300 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 790218-790908 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7902 18-790908 bp Feature: gene Location: 791401-791589 bp Feature: gene Location: 791600-791833 bp Feature: domain Description: DinI Location: 791642-791828 bp Feature: domain Description: DinI Location: 791642 -79182 8 bp Feature: gene Location: 1123757-1124896 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1123940-1124840 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 112 3940-112 4840 bp Feature: gene Location: 1125067-1125309 bp Feature: domain Description: DinI Location: 1125118-1125298 bp Feature: domain Description: DinI Location: 112 5118-112 52 98 bp Feature: gene Location: 1125924-1127411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1126329-1127019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 632 9-112 7019 bp Feature: gene Location: 1127490-1127909 bp Feature: domain Description: PRK10276 Location: 1127493-1127904 bp Feature: domain Description: PRK102 76 Location: 112 7493-112 7904 bp Feature: gene Location: 1127912-1129177 bp Feature: domain Description: umuC Location: 1127915-1129175 bp Feature: domain Description: umuC Location: 112 7915-112 9175 bp Feature: gene Location: 1307284-1307988 bp Feature: domain Description: Rve Location: 1307287-1307932 bp Feature: domain Description: Rve Location: 13072 87-1307932 bp Feature: gene Location: 1308054-1308503 bp Feature: domain Description: PinE Location: 1308063-1308495 bp Feature: domain Description: PinE Location: 1308063-1308495 bp Feature: gene Location: 1309898-1311385 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1310303-1310993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1310303-1310993 bp Feature: gene Location: 1311378-1311884 bp Feature: domain Description: PRK10276 Location: 1311468-1311879 bp Feature: domain Description: PRK102 76 Location: 1311468-1311879 bp Feature: gene Location: 1311886-1313151 bp Feature: domain Description: umuC Location: 1311889-1313149 bp Feature: domain Description: umuC Location: 1311889-1313149 bp Feature: gene Location: 2448298-2449356 bp Feature: domain Description: YccC Location: 2448304-2449342 bp Feature: domain Description: YccC Location: 2 448304-2 449342 bp Feature: gene Location: 2449455-2449928 bp Feature: domain Description: PRK10016 Location: 2449458-2449917 bp Feature: domain Description: PRK10016 Location: 2 449458-2 449917 bp Feature: gene Location: 2450010-2451497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2450415-2451105 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 450415-2 451105 bp Feature: gene Location: 2452015-2453178 bp Feature: domain Description: dacD Location: 2452018-2453173 bp Feature: domain Description: dacD Location: 2 452 018-2 453173 bp Feature: gene Location: 2453359-2454783 bp Feature: domain Description: SbcB Location: 2453365-2454781 bp Feature: domain Description: SbcB Location: 2 453365-2 454781 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), dam (TIGR00571), Phage_GPA (pfam05840), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789), umuC (PRK03609), Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)