myRT

myRT report for GCA_001031635.1_Kleb_pneu_CHS131_V1

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Seq: KQ088394.1 Klebsiella pneumoniae strain CHS131 genomic scaffold aetAu-supercont1.1, whole genome shotgun sequence (2036072 bp)
Overview 1 RT 1: 584439-587846 bp 2 RT 2: 1361438-1366856 bp 3 RT 3: 1546526-1552391 bp Neighborhood of RT #1 [584439, 587947] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1361438, 1366858] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1546526, 1552393] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 584439-585170 bp Feature: domain Description: Laminin_G_3 Location: 584760-585114 bp Feature: domain Description: Laminin_G_3 Location: 584760-5851 1 4 bp Feature: gene Location: 585167-585376 bp Feature: gene Location: 585826-587313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586231-586921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586231 -586921 bp Feature: gene Location: 587391-587630 bp Feature: gene Location: 587630-587947 bp Feature: domain Description: PRK10276 Location: 587636-587750 bp Feature: domain Description: PRK1 0276 Location: 587636-587750 bp Feature: domain Description: PRK10276 Location: 587777-587846 bp Feature: domain Description: PRK1 0276 Location: 587777-587846 bp Feature: gene Location: 1361438-1362577 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1361621-1362521 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 361 621 -1 362521 bp Feature: gene Location: 1362748-1362990 bp Feature: domain Description: DinI Location: 1362799-1362979 bp Feature: domain Description: DinI Location: 1 362799-1 362979 bp Feature: gene Location: 1363605-1365092 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1364010-1364700 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 36401 0-1 364700 bp Feature: gene Location: 1365171-1365590 bp Feature: domain Description: PRK10276 Location: 1365174-1365585 bp Feature: domain Description: PRK1 0276 Location: 1 3651 74-1 365585 bp Feature: gene Location: 1365593-1366858 bp Feature: domain Description: umuC Location: 1365596-1366856 bp Feature: domain Description: umuC Location: 1 365596-1 366856 bp Feature: gene Location: 1546526-1547230 bp Feature: domain Description: Rve Location: 1546529-1547174 bp Feature: domain Description: Rve Location: 1 546529-1 5471 74 bp Feature: gene Location: 1547296-1547745 bp Feature: domain Description: PinE Location: 1547305-1547737 bp Feature: domain Description: PinE Location: 1 547305-1 547737 bp Feature: gene Location: 1549140-1550627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1549545-1550235 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 549545-1 550235 bp Feature: gene Location: 1550620-1551126 bp Feature: domain Description: PRK10276 Location: 1550710-1551121 bp Feature: domain Description: PRK1 0276 Location: 1 55071 0-1 551 1 21 bp Feature: gene Location: 1551128-1552393 bp Feature: domain Description: umuC Location: 1551131-1552391 bp Feature: domain Description: umuC Location: 1 551 1 31 -1 552391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609), Rve (COG3316), PinE (COG1961)

Seq: KQ088398.1 Klebsiella pneumoniae strain CHS131 genomic scaffold aetAu-supercont1.5, whole genome shotgun sequence (157302 bp)
Overview 1 RT 1: 78207-82611 bp 2 RT 2: 99718-104712 bp Neighborhood of RT #1 [78207, 82611] DDE_Tnp_IS1 BetT RVT-GII PRK09928 Neighborhood of RT #2 [99718, 104714] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 78207-78500 bp Feature: domain Description: DDE_Tnp_IS1 Location: 78210-78498 bp Feature: domain Description: DDE_Tnp_IS1 Location: 782 10-78498 bp Feature: gene Location: 78652-80130 bp Feature: domain Description: BetT Location: 78682-80122 bp Feature: domain Description: BetT Location: 78682 -8012 2 bp Feature: gene Location: 80179-81666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80584-81274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80584-812 74 bp Feature: gene Location: 82062-82559 bp Feature: domain Description: PRK09928 Location: 82083-82557 bp Feature: domain Description: PRK0992 8 Location: 82 083-82 557 bp Feature: gene Location: 82504-82611 bp Feature: gene Location: 99718-100989 bp Feature: domain Description: umuC Location: 99721-100984 bp Feature: domain Description: umuC Location: 9972 1-100984 bp Feature: gene Location: 100989-101414 bp Feature: domain Description: PRK10276 Location: 100992-101400 bp Feature: domain Description: PRK102 76 Location: 100992 -101400 bp Feature: gene Location: 101817-103304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102222-102912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 2 2 2 -102 912 bp Feature: gene Location: 103538-103768 bp Feature: gene Location: 104289-104714 bp Feature: domain Description: Antirestrict Location: 104424-104712 bp Feature: domain Description: Antirestrict Location: 10442 4-104712 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), BetT (COG1292), RVT-GII, PRK09928 (choline transport protein BetT; Provisional), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), Antirestrict (pfam03230), umuC (PRK03609)

Seq: KQ088395.1 Klebsiella pneumoniae strain CHS131 genomic scaffold aetAu-supercont1.2, whole genome shotgun sequence (2034857 bp)
Overview 1 RT 1: 24210-30693 bp Neighborhood of RT #1 [24210, 30695] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 24210-25268 bp Feature: domain Description: YccC Location: 24216-25254 bp Feature: domain Description: YccC Location: 24216-25254 bp Feature: gene Location: 25367-25840 bp Feature: domain Description: PRK10016 Location: 25370-25829 bp Feature: domain Description: PRK10016 Location: 253 70-25829 bp Feature: gene Location: 25922-27409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26327-27017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 263 27-27017 bp Feature: gene Location: 27927-29090 bp Feature: domain Description: dacD Location: 27930-29085 bp Feature: domain Description: dacD Location: 2793 0-29085 bp Feature: gene Location: 29271-30695 bp Feature: domain Description: SbcB Location: 29277-30693 bp Feature: domain Description: SbcB Location: 29277-3 0693 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)