myRT

myRT report for GCA_001031645.1_Kleb_pneu_CHS132_V1

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Seq: KQ088422.1 Klebsiella pneumoniae strain CHS132 genomic scaffold aetyK-supercont1.3, whole genome shotgun sequence (297406 bp)
Overview 1 RT 1: 156243-161237 bp Neighborhood of RT #1 [156243, 161239] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 156243-157514 bp Feature: domain Description: umuC Location: 156246-157509 bp Feature: domain Description: umuC Location: 1 56246-1 57509 bp Feature: gene Location: 157514-157939 bp Feature: domain Description: PRK10276 Location: 157517-157925 bp Feature: domain Description: PRK1 0276 Location: 1 5751 7-1 57925 bp Feature: gene Location: 158342-159829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 158747-159437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 58747-1 59437 bp Feature: gene Location: 160063-160293 bp Feature: gene Location: 160814-161239 bp Feature: domain Description: Antirestrict Location: 160949-161237 bp Feature: domain Description: Antirestrict Location: 1 60949-1 61 237 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088420.1 Klebsiella pneumoniae strain CHS132 genomic scaffold aetyK-supercont1.1, whole genome shotgun sequence (4669153 bp)
Overview 1 RT 1: 583473-586880 bp 2 RT 2: 1026115-1031720 bp 3 RT 3: 1369400-1374818 bp 4 RT 4: 1553064-1558800 bp 5 RT 5: 2757770-2764253 bp Neighborhood of RT #1 [583473, 586981] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026115, 1031746] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369400, 1374820] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1553064, 1558802] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2757770, 2764255] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583473-584204 bp Feature: domain Description: Laminin_G_3 Location: 583794-584148 bp Feature: domain Description: Laminin_G_3 Location: 583794-584148 bp Feature: gene Location: 584201-584410 bp Feature: gene Location: 584860-586347 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585265-585955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5852 65-585955 bp Feature: gene Location: 586425-586664 bp Feature: gene Location: 586664-586981 bp Feature: domain Description: PRK10276 Location: 586670-586784 bp Feature: domain Description: PRK102 76 Location: 586670-586784 bp Feature: domain Description: PRK10276 Location: 586811-586880 bp Feature: domain Description: PRK102 76 Location: 586811-586880 bp Feature: gene Location: 1026115-1026678 bp Feature: domain Description: YbjK Location: 1026121-1026658 bp Feature: domain Description: YbjK Location: 102 612 1-102 6658 bp Feature: gene Location: 1026801-1027853 bp Feature: domain Description: int Location: 1026804-1027803 bp Feature: domain Description: int Location: 102 6804-102 7803 bp Feature: gene Location: 1028269-1029756 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028674-1029364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 8674-102 9364 bp Feature: gene Location: 1029855-1030799 bp Feature: gene Location: 1030811-1031746 bp Feature: domain Description: Phage_CI_repr Location: 1030895-1031078 bp Feature: domain Description: Phage_CI_repr Location: 1030895-1031078 bp Feature: domain Description: Phage_CI_repr Location: 1031207-1031399 bp Feature: domain Description: Phage_CI_repr Location: 10312 07-1031399 bp Feature: domain Description: Phage_CI_C Location: 1031426-1031720 bp Feature: domain Description: Phage_CI_C Location: 103142 6-103172 0 bp Feature: gene Location: 1369400-1370539 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369583-1370483 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369583-1370483 bp Feature: gene Location: 1370710-1370952 bp Feature: domain Description: DinI Location: 1370761-1370941 bp Feature: domain Description: DinI Location: 1370761-1370941 bp Feature: gene Location: 1371567-1373054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371972-1372662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1371972 -1372 662 bp Feature: gene Location: 1373133-1373552 bp Feature: domain Description: PRK10276 Location: 1373136-1373547 bp Feature: domain Description: PRK102 76 Location: 1373136-1373547 bp Feature: gene Location: 1373555-1374820 bp Feature: domain Description: umuC Location: 1373558-1374818 bp Feature: domain Description: umuC Location: 1373558-1374818 bp Feature: gene Location: 1553064-1553639 bp Feature: domain Description: Rve Location: 1553067-1553583 bp Feature: domain Description: Rve Location: 1553067-1553583 bp Feature: gene Location: 1553705-1554154 bp Feature: domain Description: PinE Location: 1553714-1554146 bp Feature: domain Description: PinE Location: 1553714-1554146 bp Feature: gene Location: 1555549-1557036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555954-1556644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1555954-1556644 bp Feature: gene Location: 1557029-1557535 bp Feature: domain Description: PRK10276 Location: 1557119-1557530 bp Feature: domain Description: PRK102 76 Location: 1557119-1557530 bp Feature: gene Location: 1557537-1558802 bp Feature: domain Description: umuC Location: 1557540-1558800 bp Feature: domain Description: umuC Location: 1557540-1558800 bp Feature: gene Location: 2757770-2758828 bp Feature: domain Description: YccC Location: 2757776-2758814 bp Feature: domain Description: YccC Location: 2 757776-2 758814 bp Feature: gene Location: 2758927-2759400 bp Feature: domain Description: PRK10016 Location: 2758930-2759389 bp Feature: domain Description: PRK10016 Location: 2 758930-2 759389 bp Feature: gene Location: 2759482-2760969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2759887-2760577 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 759887-2 760577 bp Feature: gene Location: 2761487-2762650 bp Feature: domain Description: dacD Location: 2761490-2762645 bp Feature: domain Description: dacD Location: 2 761490-2 762 645 bp Feature: gene Location: 2762831-2764255 bp Feature: domain Description: SbcB Location: 2762837-2764253 bp Feature: domain Description: SbcB Location: 2 762 837-2 7642 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)