myRT

myRT report for GCA_001031705.1_Kleb_pneu_CHS134_V1

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Seq: KQ088431.1 Klebsiella pneumoniae strain CHS134 genomic scaffold aetAe-supercont1.1, whole genome shotgun sequence (5569579 bp)
Overview 1 RT 1: 583602-587009 bp 2 RT 2: 1027600-1033205 bp 3 RT 3: 1370912-1376330 bp 4 RT 4: 1554439-1560304 bp 5 RT 5: 2928356-2934839 bp Neighborhood of RT #1 [583602, 587110] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1027600, 1033231] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1370912, 1376332] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1554439, 1560306] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2928356, 2934841] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583602-584333 bp Feature: domain Description: Laminin_G_3 Location: 583923-584277 bp Feature: domain Description: Laminin_G_3 Location: 583923-584277 bp Feature: gene Location: 584330-584539 bp Feature: gene Location: 584989-586476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585394-586084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585394-586084 bp Feature: gene Location: 586554-586793 bp Feature: gene Location: 586793-587110 bp Feature: domain Description: PRK10276 Location: 586799-586913 bp Feature: domain Description: PRK1 0276 Location: 586799-58691 3 bp Feature: domain Description: PRK10276 Location: 586940-587009 bp Feature: domain Description: PRK1 0276 Location: 586940-587009 bp Feature: gene Location: 1027600-1028163 bp Feature: domain Description: YbjK Location: 1027606-1028143 bp Feature: domain Description: YbjK Location: 1 027606-1 0281 43 bp Feature: gene Location: 1028286-1029338 bp Feature: domain Description: int Location: 1028289-1029288 bp Feature: domain Description: int Location: 1 028289-1 029288 bp Feature: gene Location: 1029754-1031241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1030159-1030849 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0301 59-1 030849 bp Feature: gene Location: 1031340-1032284 bp Feature: gene Location: 1032296-1033231 bp Feature: domain Description: Phage_CI_repr Location: 1032380-1032563 bp Feature: domain Description: Phage_CI_repr Location: 1 032380-1 032563 bp Feature: domain Description: Phage_CI_repr Location: 1032692-1032884 bp Feature: domain Description: Phage_CI_repr Location: 1 032692-1 032884 bp Feature: domain Description: Phage_CI_C Location: 1032911-1033205 bp Feature: domain Description: Phage_CI_C Location: 1 03291 1 -1 033205 bp Feature: gene Location: 1370912-1372051 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1371095-1371995 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 371 095-1 371 995 bp Feature: gene Location: 1372222-1372464 bp Feature: domain Description: DinI Location: 1372273-1372453 bp Feature: domain Description: DinI Location: 1 372273-1 372453 bp Feature: gene Location: 1373079-1374566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1373484-1374174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 373484-1 3741 74 bp Feature: gene Location: 1374645-1375064 bp Feature: domain Description: PRK10276 Location: 1374648-1375059 bp Feature: domain Description: PRK1 0276 Location: 1 374648-1 375059 bp Feature: gene Location: 1375067-1376332 bp Feature: domain Description: umuC Location: 1375070-1376330 bp Feature: domain Description: umuC Location: 1 375070-1 376330 bp Feature: gene Location: 1554439-1555143 bp Feature: domain Description: Rve Location: 1554442-1555087 bp Feature: domain Description: Rve Location: 1 554442-1 555087 bp Feature: gene Location: 1555209-1555658 bp Feature: domain Description: PinE Location: 1555218-1555650 bp Feature: domain Description: PinE Location: 1 55521 8-1 555650 bp Feature: gene Location: 1557053-1558540 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1557458-1558148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 557458-1 5581 48 bp Feature: gene Location: 1558533-1559039 bp Feature: domain Description: PRK10276 Location: 1558623-1559034 bp Feature: domain Description: PRK1 0276 Location: 1 558623-1 559034 bp Feature: gene Location: 1559041-1560306 bp Feature: domain Description: umuC Location: 1559044-1560304 bp Feature: domain Description: umuC Location: 1 559044-1 560304 bp Feature: gene Location: 2928356-2929414 bp Feature: domain Description: YccC Location: 2928362-2929400 bp Feature: domain Description: YccC Location: 2928362-2929400 bp Feature: gene Location: 2929513-2929986 bp Feature: domain Description: PRK10016 Location: 2929516-2929975 bp Feature: domain Description: PRK1 001 6 Location: 292951 6-2929975 bp Feature: gene Location: 2930068-2931555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2930473-2931163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2930473-2931 1 63 bp Feature: gene Location: 2932073-2933236 bp Feature: domain Description: dacD Location: 2932076-2933231 bp Feature: domain Description: dacD Location: 2932076-2933231 bp Feature: gene Location: 2933417-2934841 bp Feature: domain Description: SbcB Location: 2933423-2934839 bp Feature: domain Description: SbcB Location: 2933423-2934839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088432.1 Klebsiella pneumoniae strain CHS134 genomic scaffold aetAe-supercont1.2, whole genome shotgun sequence (194908 bp)
Overview 1 RT 1: 136061-141055 bp Neighborhood of RT #1 [136061, 141057] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 136061-137332 bp Feature: domain Description: umuC Location: 136064-137327 bp Feature: domain Description: umuC Location: 136064-13732 7 bp Feature: gene Location: 137332-137757 bp Feature: domain Description: PRK10276 Location: 137335-137743 bp Feature: domain Description: PRK102 76 Location: 137335-137743 bp Feature: gene Location: 138160-139647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138565-139255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138565-1392 55 bp Feature: gene Location: 139881-140111 bp Feature: gene Location: 140632-141057 bp Feature: domain Description: Antirestrict Location: 140767-141055 bp Feature: domain Description: Antirestrict Location: 140767-141055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)