myRT

myRT report for GCA_001031715.1_Kleb_pneu_CHS135_V1

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Seq: KQ088435.1 Klebsiella pneumoniae strain CHS135 genomic scaffold aetzi-supercont1.2, whole genome shotgun sequence (1718995 bp)
Overview 1 RT 1: 698161-703766 bp 2 RT 2: 1042711-1048129 bp 3 RT 3: 1226040-1231575 bp Neighborhood of RT #1 [698161, 703792] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #2 [1042711, 1048131] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #3 [1226040, 1231577] DDE_Tnp_IS240 PinE RVT-GII PRK10276 umuC Feature: gene Location: 698161-698724 bp Feature: domain Description: YbjK Location: 698167-698704 bp Feature: domain Description: YbjK Location: 6981 67-698704 bp Feature: gene Location: 698847-699899 bp Feature: domain Description: int Location: 698850-699849 bp Feature: domain Description: int Location: 698850-699849 bp Feature: gene Location: 700315-701802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700720-701410 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 700720-701 41 0 bp Feature: gene Location: 701901-702845 bp Feature: gene Location: 702857-703792 bp Feature: domain Description: Phage_CI_repr Location: 702941-703124 bp Feature: domain Description: Phage_CI_repr Location: 702941 -7031 24 bp Feature: domain Description: Phage_CI_repr Location: 703253-703445 bp Feature: domain Description: Phage_CI_repr Location: 703253-703445 bp Feature: domain Description: Phage_CI_C Location: 703472-703766 bp Feature: domain Description: Phage_CI_C Location: 703472-703766 bp Feature: gene Location: 1042711-1043850 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1042894-1043794 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 042894-1 043794 bp Feature: gene Location: 1044021-1044263 bp Feature: domain Description: DinI Location: 1044072-1044252 bp Feature: domain Description: DinI Location: 1 044072-1 044252 bp Feature: gene Location: 1044878-1046365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1045283-1045973 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 045283-1 045973 bp Feature: gene Location: 1046444-1046863 bp Feature: domain Description: PRK10276 Location: 1046447-1046858 bp Feature: domain Description: PRK1 0276 Location: 1 046447-1 046858 bp Feature: gene Location: 1046866-1048131 bp Feature: domain Description: umuC Location: 1046869-1048129 bp Feature: domain Description: umuC Location: 1 046869-1 0481 29 bp Feature: gene Location: 1226040-1226414 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1226043-1226346 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1 226043-1 226346 bp Feature: gene Location: 1226480-1226929 bp Feature: domain Description: PinE Location: 1226489-1226921 bp Feature: domain Description: PinE Location: 1 226489-1 226921 bp Feature: gene Location: 1228324-1229811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1228729-1229419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 228729-1 22941 9 bp Feature: gene Location: 1229804-1230310 bp Feature: domain Description: PRK10276 Location: 1229894-1230305 bp Feature: domain Description: PRK1 0276 Location: 1 229894-1 230305 bp Feature: gene Location: 1230312-1231577 bp Feature: domain Description: umuC Location: 1230315-1231575 bp Feature: domain Description: umuC Location: 1 23031 5-1 231 575 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbjK (COG3226), int (PHA02601), RVT-GII, Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DDE_Tnp_IS240 (pfam13610)
PinE (COG1961)

Seq: KQ088434.1 Klebsiella pneumoniae strain CHS135 genomic scaffold aetzi-supercont1.1, whole genome shotgun sequence (2285557 bp)
Overview 1 RT 1: 884585-891068 bp Neighborhood of RT #1 [884585, 891070] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 884585-885643 bp Feature: domain Description: YccC Location: 884591-885629 bp Feature: domain Description: YccC Location: 884591-88562 9 bp Feature: gene Location: 885742-886215 bp Feature: domain Description: PRK10016 Location: 885745-886204 bp Feature: domain Description: PRK10016 Location: 885745-8862 04 bp Feature: gene Location: 886297-887784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886702-887392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 886702 -887392 bp Feature: gene Location: 888302-889465 bp Feature: domain Description: dacD Location: 888305-889460 bp Feature: domain Description: dacD Location: 888305-889460 bp Feature: gene Location: 889646-891070 bp Feature: domain Description: SbcB Location: 889652-891068 bp Feature: domain Description: SbcB Location: 889652 -891068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088439.1 Klebsiella pneumoniae strain CHS135 genomic scaffold aetzi-supercont1.6, whole genome shotgun sequence (175029 bp)
Overview 1 RT 1: 117220-122214 bp Neighborhood of RT #1 [117220, 122216] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 117220-118491 bp Feature: domain Description: umuC Location: 117223-118486 bp Feature: domain Description: umuC Location: 117223 -118486 bp Feature: gene Location: 118491-118916 bp Feature: domain Description: PRK10276 Location: 118494-118902 bp Feature: domain Description: PRK10276 Location: 118494-118902 bp Feature: gene Location: 119319-120806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119724-120414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119724-120414 bp Feature: gene Location: 121040-121270 bp Feature: gene Location: 121791-122216 bp Feature: domain Description: Antirestrict Location: 121926-122214 bp Feature: domain Description: Antirestrict Location: 121926-122214 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)