myRT

myRT report for GCA_001031725.1_Kleb_pneu_CHS137_V1

Download annotations/find similar RTs

Seq: KQ088445.1 Klebsiella pneumoniae strain CHS137 genomic scaffold aetgT-supercont1.1, whole genome shotgun sequence (4875182 bp)
Overview 1 RT 1: 1375577-1380205 bp 2 RT 2: 2806777-2813260 bp 3 RT 3: 3257915-3261396 bp Neighborhood of RT #1 [1375577, 1380207] DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [2806777, 2813262] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #3 [3257915, 3261396] Terminase_2 RVT-GII Feature: gene Location: 1375577-1375819 bp Feature: domain Description: DinI Location: 1375628-1375808 bp Feature: domain Description: DinI Location: 1 375628-1 375808 bp Feature: gene Location: 1376328-1376504 bp Feature: gene Location: 1376954-1378441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377359-1378049 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 377359-1 378049 bp Feature: gene Location: 1378520-1378939 bp Feature: domain Description: PRK10276 Location: 1378523-1378934 bp Feature: domain Description: PRK1 0276 Location: 1 378523-1 378934 bp Feature: gene Location: 1378942-1380207 bp Feature: domain Description: umuC Location: 1378945-1380205 bp Feature: domain Description: umuC Location: 1 378945-1 380205 bp Feature: gene Location: 2806777-2807835 bp Feature: domain Description: YccC Location: 2806783-2807821 bp Feature: domain Description: YccC Location: 2806783-2807821 bp Feature: gene Location: 2807934-2808407 bp Feature: domain Description: PRK10016 Location: 2807937-2808396 bp Feature: domain Description: PRK1 001 6 Location: 2807937-2808396 bp Feature: gene Location: 2808489-2809976 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2808894-2809584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2808894-2809584 bp Feature: gene Location: 2810494-2811657 bp Feature: domain Description: dacD Location: 2810497-2811652 bp Feature: domain Description: dacD Location: 281 0497-281 1 652 bp Feature: gene Location: 2811838-2813262 bp Feature: domain Description: SbcB Location: 2811844-2813260 bp Feature: domain Description: SbcB Location: 281 1 844-281 3260 bp Feature: gene Location: 3257915-3258499 bp Feature: domain Description: Terminase_2 Location: 3257960-3258425 bp Feature: domain Description: Terminase_2 Location: 3257960-3258425 bp Feature: gene Location: 3258577-3258834 bp Feature: gene Location: 3259235-3260722 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3259640-3260330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3259640-3260330 bp Feature: gene Location: 3260819-3261157 bp Feature: gene Location: 3261157-3261396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925), Terminase_2 (pfam03592)

Seq: KQ088447.1 Klebsiella pneumoniae strain CHS137 genomic scaffold aetgT-supercont1.3, whole genome shotgun sequence (162966 bp)
Overview 1 RT 1: 104019-109013 bp Neighborhood of RT #1 [104019, 109015] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 104019-105290 bp Feature: domain Description: umuC Location: 104022-105285 bp Feature: domain Description: umuC Location: 10402 2 -1052 85 bp Feature: gene Location: 105290-105715 bp Feature: domain Description: PRK10276 Location: 105293-105701 bp Feature: domain Description: PRK102 76 Location: 1052 93-105701 bp Feature: gene Location: 106118-107605 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106523-107213 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10652 3-1072 13 bp Feature: gene Location: 107839-108069 bp Feature: gene Location: 108590-109015 bp Feature: domain Description: Antirestrict Location: 108725-109013 bp Feature: domain Description: Antirestrict Location: 10872 5-109013 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)