myRT

myRT report for GCA_001031745.1_Kleb_pneu_CHS138_V1

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Seq: KQ088451.1 Klebsiella pneumoniae strain CHS138 genomic scaffold aetzK-supercont1.1, whole genome shotgun sequence (3115959 bp)
Overview 1 RT 1: 332443-335850 bp 2 RT 2: 774863-780468 bp 3 RT 3: 1114100-1119518 bp 4 RT 4: 1302590-1307909 bp 5 RT 5: 2559913-2566396 bp Neighborhood of RT #1 [332443, 335951] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [774863, 780494] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1114100, 1119520] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1302590, 1307911] PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [2559913, 2566398] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 332443-333174 bp Feature: domain Description: Laminin_G_3 Location: 332764-333118 bp Feature: domain Description: Laminin_G_3 Location: 332764-3331 1 8 bp Feature: gene Location: 333171-333380 bp Feature: gene Location: 333830-335317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334235-334925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334235-334925 bp Feature: gene Location: 335395-335634 bp Feature: gene Location: 335634-335951 bp Feature: domain Description: PRK10276 Location: 335640-335754 bp Feature: domain Description: PRK1 0276 Location: 335640-335754 bp Feature: domain Description: PRK10276 Location: 335781-335850 bp Feature: domain Description: PRK1 0276 Location: 335781 -335850 bp Feature: gene Location: 774863-775426 bp Feature: domain Description: YbjK Location: 774869-775406 bp Feature: domain Description: YbjK Location: 774869-775406 bp Feature: gene Location: 775549-776601 bp Feature: domain Description: int Location: 775552-776551 bp Feature: domain Description: int Location: 775552-776551 bp Feature: gene Location: 777017-778504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777422-778112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 777422-7781 1 2 bp Feature: gene Location: 778603-779547 bp Feature: gene Location: 779559-780494 bp Feature: domain Description: Phage_CI_repr Location: 779643-779826 bp Feature: domain Description: Phage_CI_repr Location: 779643-779826 bp Feature: domain Description: Phage_CI_repr Location: 779955-780147 bp Feature: domain Description: Phage_CI_repr Location: 779955-7801 47 bp Feature: domain Description: Phage_CI_C Location: 780174-780468 bp Feature: domain Description: Phage_CI_C Location: 7801 74-780468 bp Feature: gene Location: 1114100-1115239 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1114283-1115183 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 1 4283-1 1 1 51 83 bp Feature: gene Location: 1115410-1115652 bp Feature: domain Description: DinI Location: 1115461-1115641 bp Feature: domain Description: DinI Location: 1 1 1 5461 -1 1 1 5641 bp Feature: gene Location: 1116267-1117754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1116672-1117362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 6672-1 1 1 7362 bp Feature: gene Location: 1117833-1118252 bp Feature: domain Description: PRK10276 Location: 1117836-1118247 bp Feature: domain Description: PRK1 0276 Location: 1 1 1 7836-1 1 1 8247 bp Feature: gene Location: 1118255-1119520 bp Feature: domain Description: umuC Location: 1118258-1119518 bp Feature: domain Description: umuC Location: 1 1 1 8258-1 1 1 951 8 bp Feature: gene Location: 1302590-1302748 bp Feature: gene Location: 1302814-1303263 bp Feature: domain Description: PinE Location: 1302823-1303255 bp Feature: domain Description: PinE Location: 1 302823-1 303255 bp Feature: gene Location: 1304658-1306145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1305063-1305753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 305063-1 305753 bp Feature: gene Location: 1306138-1306644 bp Feature: domain Description: PRK10276 Location: 1306228-1306639 bp Feature: domain Description: PRK1 0276 Location: 1 306228-1 306639 bp Feature: gene Location: 1306646-1307911 bp Feature: domain Description: umuC Location: 1306649-1307909 bp Feature: domain Description: umuC Location: 1 306649-1 307909 bp Feature: gene Location: 2559913-2560971 bp Feature: domain Description: YccC Location: 2559919-2560957 bp Feature: domain Description: YccC Location: 255991 9-2560957 bp Feature: gene Location: 2561070-2561543 bp Feature: domain Description: PRK10016 Location: 2561073-2561532 bp Feature: domain Description: PRK1 001 6 Location: 2561 073-2561 532 bp Feature: gene Location: 2561625-2563112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2562030-2562720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2562030-2562720 bp Feature: gene Location: 2563630-2564793 bp Feature: domain Description: dacD Location: 2563633-2564788 bp Feature: domain Description: dacD Location: 2563633-2564788 bp Feature: gene Location: 2564974-2566398 bp Feature: domain Description: SbcB Location: 2564980-2566396 bp Feature: domain Description: SbcB Location: 2564980-2566396 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088455.1 Klebsiella pneumoniae strain CHS138 genomic scaffold aetzK-supercont1.5, whole genome shotgun sequence (175897 bp)
Overview 1 RT 1: 118312-123306 bp Neighborhood of RT #1 [118312, 123308] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 118312-119583 bp Feature: domain Description: umuC Location: 118315-119578 bp Feature: domain Description: umuC Location: 118315-119578 bp Feature: gene Location: 119583-120008 bp Feature: domain Description: PRK10276 Location: 119586-119994 bp Feature: domain Description: PRK102 76 Location: 119586-119994 bp Feature: gene Location: 120411-121898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120816-121506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 0816-12 1506 bp Feature: gene Location: 122132-122362 bp Feature: gene Location: 122883-123308 bp Feature: domain Description: Antirestrict Location: 123018-123306 bp Feature: domain Description: Antirestrict Location: 12 3018-12 3306 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)