myRT

myRT report for GCA_001031805.1_Kleb_pneu_CHS141_V1

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Seq: KQ088482.1 Klebsiella pneumoniae strain CHS141 genomic scaffold aetzx-supercont1.9, whole genome shotgun sequence (141113 bp)
Overview 1 RT 1: 82230-87224 bp Neighborhood of RT #1 [82230, 87226] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 82230-83501 bp Feature: domain Description: umuC Location: 82233-83496 bp Feature: domain Description: umuC Location: 82233-83496 bp Feature: gene Location: 83501-83926 bp Feature: domain Description: PRK10276 Location: 83504-83912 bp Feature: domain Description: PRK1 0276 Location: 83504-8391 2 bp Feature: gene Location: 84329-85816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84734-85424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84734-85424 bp Feature: gene Location: 86050-86280 bp Feature: gene Location: 86801-87226 bp Feature: domain Description: Antirestrict Location: 86936-87224 bp Feature: domain Description: Antirestrict Location: 86936-87224 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088475.1 Klebsiella pneumoniae strain CHS141 genomic scaffold aetzx-supercont1.2, whole genome shotgun sequence (1438511 bp)
Overview 1 RT 1: 883846-890329 bp Neighborhood of RT #1 [883846, 890331] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883846-884904 bp Feature: domain Description: YccC Location: 883852-884890 bp Feature: domain Description: YccC Location: 883852 -884890 bp Feature: gene Location: 885003-885476 bp Feature: domain Description: PRK10016 Location: 885006-885465 bp Feature: domain Description: PRK10016 Location: 885006-885465 bp Feature: gene Location: 885558-887045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885963-886653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885963-886653 bp Feature: gene Location: 887563-888726 bp Feature: domain Description: dacD Location: 887566-888721 bp Feature: domain Description: dacD Location: 887566-88872 1 bp Feature: gene Location: 888907-890331 bp Feature: domain Description: SbcB Location: 888913-890329 bp Feature: domain Description: SbcB Location: 888913-89032 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088474.1 Klebsiella pneumoniae strain CHS141 genomic scaffold aetzx-supercont1.1, whole genome shotgun sequence (1618811 bp)
Overview 1 RT 1: 332941-336348 bp 2 RT 2: 775970-781575 bp 3 RT 3: 1120273-1125691 bp 4 RT 4: 1303770-1309635 bp Neighborhood of RT #1 [332941, 336449] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [775970, 781601] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1120273, 1125693] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [1303770, 1309637] Rve PinE RVT-GII PRK10276 umuC Feature: gene Location: 332941-333672 bp Feature: domain Description: Laminin_G_3 Location: 333262-333616 bp Feature: domain Description: Laminin_G_3 Location: 3 3 3 262-3 3 3 616 bp Feature: gene Location: 333669-333878 bp Feature: gene Location: 334328-335815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 334733-335423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 3 473 3 -3 3 5423 bp Feature: gene Location: 335893-336132 bp Feature: gene Location: 336132-336449 bp Feature: domain Description: PRK10276 Location: 336138-336252 bp Feature: domain Description: PRK10276 Location: 3 3 613 8-3 3 6252 bp Feature: domain Description: PRK10276 Location: 336279-336348 bp Feature: domain Description: PRK10276 Location: 3 3 6279-3 3 63 48 bp Feature: gene Location: 775970-776533 bp Feature: domain Description: YbjK Location: 775976-776513 bp Feature: domain Description: YbjK Location: 775976-776513 bp Feature: gene Location: 776656-777708 bp Feature: domain Description: int Location: 776659-777658 bp Feature: domain Description: int Location: 776659-777658 bp Feature: gene Location: 778124-779611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778529-779219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778529-779219 bp Feature: gene Location: 779710-780654 bp Feature: gene Location: 780666-781601 bp Feature: domain Description: Phage_CI_repr Location: 780750-780933 bp Feature: domain Description: Phage_CI_repr Location: 780750-78093 3 bp Feature: domain Description: Phage_CI_repr Location: 781062-781254 bp Feature: domain Description: Phage_CI_repr Location: 781062-781254 bp Feature: domain Description: Phage_CI_C Location: 781281-781575 bp Feature: domain Description: Phage_CI_C Location: 781281-781575 bp Feature: gene Location: 1120273-1121412 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1120456-1121356 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1120456-11213 56 bp Feature: gene Location: 1121583-1121825 bp Feature: domain Description: DinI Location: 1121634-1121814 bp Feature: domain Description: DinI Location: 112163 4-1121814 bp Feature: gene Location: 1122440-1123927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122845-1123535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1122845-1123 53 5 bp Feature: gene Location: 1124006-1124425 bp Feature: domain Description: PRK10276 Location: 1124009-1124420 bp Feature: domain Description: PRK10276 Location: 1124009-1124420 bp Feature: gene Location: 1124428-1125693 bp Feature: domain Description: umuC Location: 1124431-1125691 bp Feature: domain Description: umuC Location: 112443 1-1125691 bp Feature: gene Location: 1303770-1304474 bp Feature: domain Description: Rve Location: 1303773-1304418 bp Feature: domain Description: Rve Location: 13 03 773 -13 04418 bp Feature: gene Location: 1304540-1304989 bp Feature: domain Description: PinE Location: 1304549-1304981 bp Feature: domain Description: PinE Location: 13 04549-13 04981 bp Feature: gene Location: 1306384-1307871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1306789-1307479 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 06789-13 07479 bp Feature: gene Location: 1307864-1308370 bp Feature: domain Description: PRK10276 Location: 1307954-1308365 bp Feature: domain Description: PRK10276 Location: 13 07954-13 083 65 bp Feature: gene Location: 1308372-1309637 bp Feature: domain Description: umuC Location: 1308375-1309635 bp Feature: domain Description: umuC Location: 13 083 75-13 0963 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961)