myRT

myRT report for GCA_001031865.1_Kleb_pneu_CHS144_V1

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Seq: KQ088505.1 Klebsiella pneumoniae strain CHS144 genomic scaffold aetyV-supercont1.5, whole genome shotgun sequence (45383 bp)
Overview 1 RT 1: 7792-12078 bp Neighborhood of RT #1 [7792, 12092] PHA02518 SR_Res_par HTH_Hin_like RVT-GII PRK10276 Feature: gene Location: 7792-8454 bp Feature: domain Description: PHA02518 Location: 7801-8425 bp Feature: domain Description: PHA0251 8 Location: 7801 -8425 bp Feature: gene Location: 8835-9497 bp Feature: domain Description: SR_Res_par Location: 8865-9294 bp Feature: domain Description: SR_Res_par Location: 8865-9294 bp Feature: domain Description: HTH_Hin_like Location: 9357-9444 bp Feature: domain Description: HTH_Hin_like Location: 9357-9444 bp Feature: gene Location: 9930-11414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10332-11022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0332-1 1 022 bp Feature: gene Location: 11494-11733 bp Feature: gene Location: 11736-12092 bp Feature: domain Description: PRK10276 Location: 11742-12078 bp Feature: domain Description: PRK1 0276 Location: 1 1 742-1 2078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), PHA02518 (ParA-like protein; Provisional), SR_Res_par (cd03767), HTH_Hin_like (cd00569), RVT-GII

Seq: KQ088504.1 Klebsiella pneumoniae strain CHS144 genomic scaffold aetyV-supercont1.4, whole genome shotgun sequence (55376 bp)
Overview 1 RT 1: 6068-10510 bp Neighborhood of RT #1 [6068, 10512] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 6068-7339 bp Feature: domain Description: umuC Location: 6071-7331 bp Feature: domain Description: umuC Location: 6071-7331 bp Feature: gene Location: 7339-7770 bp Feature: domain Description: PRK10276 Location: 7390-7753 bp Feature: domain Description: PRK102 76 Location: 7390-7753 bp Feature: gene Location: 8179-9663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8581-9271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8581-92 71 bp Feature: gene Location: 9815-10090 bp Feature: domain Description: InsA Location: 9821-10082 bp Feature: domain Description: InsA Location: 982 1-10082 bp Feature: gene Location: 10135-10512 bp Feature: domain Description: DDE_Tnp_IS1 Location: 10138-10510 bp Feature: domain Description: DDE_Tnp_IS1 Location: 10138-10510 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1 (pfam03400), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677)

Seq: KQ088501.1 Klebsiella pneumoniae strain CHS144 genomic scaffold aetyV-supercont1.1, whole genome shotgun sequence (4753393 bp)
Overview 1 RT 1: 583478-586885 bp 2 RT 2: 1026219-1031824 bp 3 RT 3: 1369795-1375213 bp 4 RT 4: 2717846-2724329 bp Neighborhood of RT #1 [583478, 586986] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1026219, 1031850] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [1369795, 1375215] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2717846, 2724331] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 583478-584209 bp Feature: domain Description: Laminin_G_3 Location: 583799-584153 bp Feature: domain Description: Laminin_G_3 Location: 583 799-584153 bp Feature: gene Location: 584206-584415 bp Feature: gene Location: 584868-586352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585270-585960 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 585270-585960 bp Feature: gene Location: 586430-586669 bp Feature: gene Location: 586669-586986 bp Feature: domain Description: PRK10276 Location: 586675-586789 bp Feature: domain Description: PRK10276 Location: 586675-586789 bp Feature: domain Description: PRK10276 Location: 586816-586885 bp Feature: domain Description: PRK10276 Location: 586816-586885 bp Feature: gene Location: 1026219-1026782 bp Feature: domain Description: YbjK Location: 1026225-1026762 bp Feature: domain Description: YbjK Location: 1026225-1026762 bp Feature: gene Location: 1026905-1027957 bp Feature: domain Description: int Location: 1026908-1027907 bp Feature: domain Description: int Location: 1026908-1027907 bp Feature: gene Location: 1028376-1029860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028778-1029468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1028778-1029468 bp Feature: gene Location: 1029959-1030903 bp Feature: gene Location: 1030915-1031850 bp Feature: domain Description: Phage_CI_repr Location: 1030999-1031182 bp Feature: domain Description: Phage_CI_repr Location: 103 0999-103 1182 bp Feature: domain Description: Phage_CI_repr Location: 1031311-1031503 bp Feature: domain Description: Phage_CI_repr Location: 103 13 11-103 1503 bp Feature: domain Description: Phage_CI_C Location: 1031530-1031824 bp Feature: domain Description: Phage_CI_C Location: 103 153 0-103 1824 bp Feature: gene Location: 1369795-1370934 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1369978-1370878 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 13 69978-13 70878 bp Feature: gene Location: 1371105-1371347 bp Feature: domain Description: DinI Location: 1371156-1371336 bp Feature: domain Description: DinI Location: 13 71156-13 713 3 6 bp Feature: gene Location: 1371965-1373449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1372367-1373057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 723 67-13 73 057 bp Feature: gene Location: 1373528-1373947 bp Feature: domain Description: PRK10276 Location: 1373531-1373942 bp Feature: domain Description: PRK10276 Location: 13 73 53 1-13 73 942 bp Feature: gene Location: 1373950-1375215 bp Feature: domain Description: umuC Location: 1373953-1375213 bp Feature: domain Description: umuC Location: 13 73 953 -13 75213 bp Feature: gene Location: 2717846-2718904 bp Feature: domain Description: YccC Location: 2717852-2718890 bp Feature: domain Description: YccC Location: 2717852-2718890 bp Feature: gene Location: 2719003-2719476 bp Feature: domain Description: PRK10016 Location: 2719006-2719465 bp Feature: domain Description: PRK10016 Location: 2719006-2719465 bp Feature: gene Location: 2719558-2721042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2719960-2720650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2719960-2720650 bp Feature: gene Location: 2721563-2722726 bp Feature: domain Description: dacD Location: 2721566-2722721 bp Feature: domain Description: dacD Location: 2721566-2722721 bp Feature: gene Location: 2722907-2724331 bp Feature: domain Description: SbcB Location: 2722913-2724329 bp Feature: domain Description: SbcB Location: 2722913 -27243 29 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: KQ088503.1 Klebsiella pneumoniae strain CHS144 genomic scaffold aetyV-supercont1.3, whole genome shotgun sequence (129583 bp)
Overview 1 RT 1: 71995-76989 bp Neighborhood of RT #1 [71995, 76991] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 71995-73266 bp Feature: domain Description: umuC Location: 71998-73261 bp Feature: domain Description: umuC Location: 71998-73261 bp Feature: gene Location: 73266-73691 bp Feature: domain Description: PRK10276 Location: 73269-73677 bp Feature: domain Description: PRK10276 Location: 73269-73677 bp Feature: gene Location: 74097-75581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74499-75189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 74 4 99-75189 bp Feature: gene Location: 75815-76045 bp Feature: gene Location: 76566-76991 bp Feature: domain Description: Antirestrict Location: 76701-76989 bp Feature: domain Description: Antirestrict Location: 76701-76989 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)