myRT

myRT report for GCA_001031905.1_Kleb_pneu_CHS147_V1

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Seq: KQ088535.1 Klebsiella pneumoniae strain CHS147 genomic scaffold aetgG-supercont1.4, whole genome shotgun sequence (172532 bp)
Overview 1 RT 1: 114948-119942 bp Neighborhood of RT #1 [114948, 119944] umuC PRK10276 RVT-GII Antirestrict Feature: gene Location: 114948-116219 bp Feature: domain Description: umuC Location: 114951-116214 bp Feature: domain Description: umuC Location: 1 1 4951 -1 1 621 4 bp Feature: gene Location: 116219-116644 bp Feature: domain Description: PRK10276 Location: 116222-116630 bp Feature: domain Description: PRK1 0276 Location: 1 1 6222-1 1 6630 bp Feature: gene Location: 117047-118534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117452-118142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 7452-1 1 81 42 bp Feature: gene Location: 118768-118998 bp Feature: gene Location: 119519-119944 bp Feature: domain Description: Antirestrict Location: 119654-119942 bp Feature: domain Description: Antirestrict Location: 1 1 9654-1 1 9942 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Antirestrict (pfam03230)

Seq: KQ088532.1 Klebsiella pneumoniae strain CHS147 genomic scaffold aetgG-supercont1.1, whole genome shotgun sequence (3417385 bp)
Overview 1 RT 1: 883629-890112 bp Neighborhood of RT #1 [883629, 890114] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 883629-884687 bp Feature: domain Description: YccC Location: 883635-884673 bp Feature: domain Description: YccC Location: 883635-884673 bp Feature: gene Location: 884786-885259 bp Feature: domain Description: PRK10016 Location: 884789-885248 bp Feature: domain Description: PRK10016 Location: 884789-8852 48 bp Feature: gene Location: 885341-886828 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885746-886436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 885746-886436 bp Feature: gene Location: 887346-888509 bp Feature: domain Description: dacD Location: 887349-888504 bp Feature: domain Description: dacD Location: 887349-888504 bp Feature: gene Location: 888690-890114 bp Feature: domain Description: SbcB Location: 888696-890112 bp Feature: domain Description: SbcB Location: 888696-890112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), RVT-GII, dacD (PRK11397), SbcB (COG2925)

Seq: KQ088534.1 Klebsiella pneumoniae strain CHS147 genomic scaffold aetgG-supercont1.3, whole genome shotgun sequence (495165 bp)
Overview 1 RT 1: 106-5201 bp Neighborhood of RT #1 [106, 5203] PinE RVT-GII PRK10276 umuC Feature: gene Location: 106-555 bp Feature: domain Description: PinE Location: 115-547 bp Feature: domain Description: PinE Location: 115-547 bp Feature: gene Location: 1950-3437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2355-3045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 55-3 045 bp Feature: gene Location: 3430-3936 bp Feature: domain Description: PRK10276 Location: 3520-3931 bp Feature: domain Description: PRK10276 Location: 3 520-3 93 1 bp Feature: gene Location: 3938-5203 bp Feature: domain Description: umuC Location: 3941-5201 bp Feature: domain Description: umuC Location: 3 941-5201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: KQ088533.1 Klebsiella pneumoniae strain CHS147 genomic scaffold aetgG-supercont1.2, whole genome shotgun sequence (1504888 bp)
Overview 1 RT 1: 1325330-1330748 bp Neighborhood of RT #1 [1325330, 1330750] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Feature: gene Location: 1325330-1326469 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1325513-1326413 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1325513-13264 13 bp Feature: gene Location: 1326640-1326882 bp Feature: domain Description: DinI Location: 1326691-1326871 bp Feature: domain Description: DinI Location: 1326691-1326871 bp Feature: gene Location: 1327497-1328984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1327902-1328592 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1327902-1328592 bp Feature: gene Location: 1329063-1329482 bp Feature: domain Description: PRK10276 Location: 1329066-1329477 bp Feature: domain Description: PRK10276 Location: 1329066-13294 77 bp Feature: gene Location: 1329485-1330750 bp Feature: domain Description: umuC Location: 1329488-1330748 bp Feature: domain Description: umuC Location: 13294 88-133074 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)